Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 RPL23AP59-201ENST00000399415 461 ntBASIC7.12□□□□□ -1.27
LMNB1P20700 GAPDHP42-201ENST00000406848 981 ntBASIC7.12□□□□□ -1.27
LMNB1P20700 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.12□□□□□ -1.27
LMNB1P20700 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC7.12□□□□□ -1.27
LMNB1P20700 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC7.12□□□□□ -1.27
LMNB1P20700 AC099677.3-201ENST00000427081 395 ntBASIC7.12□□□□□ -1.27
LMNB1P20700 AC124944.2-201ENST00000429866 1242 ntBASIC7.12□□□□□ -1.27
LMNB1P20700 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC7.12□□□□□ -1.27
LMNB1P20700 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC7.12□□□□□ -1.27
LMNB1P20700 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC7.12□□□□□ -1.27
LMNB1P20700 PA2G4P6-201ENST00000438325 1197 ntBASIC7.12□□□□□ -1.27
LMNB1P20700 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC7.12□□□□□ -1.27
LMNB1P20700 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC7.12□□□□□ -1.27
LMNB1P20700 CDC42P1-201ENST00000456658 548 ntBASIC7.12□□□□□ -1.27
LMNB1P20700 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC7.12□□□□□ -1.27
LMNB1P20700 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC7.12□□□□□ -1.27
LMNB1P20700 AC068724.1-201ENST00000487100 792 ntBASIC7.12□□□□□ -1.27
LMNB1P20700 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC7.12□□□□□ -1.27
LMNB1P20700 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LMNB1P20700 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC7.12□□□□□ -1.27
LMNB1P20700 PCNPP1-201ENST00000552501 511 ntBASIC7.12□□□□□ -1.27
LMNB1P20700 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.12□□□□□ -1.27
LMNB1P20700 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC7.12□□□□□ -1.27
LMNB1P20700 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC7.12□□□□□ -1.27
LMNB1P20700 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
LMNB1P20700 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
LMNB1P20700 MIR4801-201ENST00000582704 82 ntBASIC7.12□□□□□ -1.27
LMNB1P20700 AC096553.1-201ENST00000605169 829 ntBASIC7.12□□□□□ -1.27
LMNB1P20700 AC004223.4-201ENST00000612426 332 ntBASIC7.12□□□□□ -1.27
LMNB1P20700 AC073968.1-201ENST00000618594 637 ntBASIC7.12□□□□□ -1.27
LMNB1P20700 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC7.12□□□□□ -1.27
LMNB1P20700 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LMNB1P20700 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LMNB1P20700 AC112255.1-201ENST00000624070 2493 ntBASIC7.12□□□□□ -1.27
LMNB1P20700 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
LMNB1P20700 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LMNB1P20700 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
LMNB1P20700 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC7.12□□□□□ -1.27
LMNB1P20700 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.12□□□□□ -1.27
LMNB1P20700 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LMNB1P20700 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LMNB1P20700 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LMNB1P20700 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LMNB1P20700 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
LMNB1P20700 TTC39DP-201ENST00000416781 1688 ntBASIC7.12□□□□□ -1.27
LMNB1P20700 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.12□□□□□ -1.27
LMNB1P20700 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LMNB1P20700 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.12□□□□□ -1.27
LMNB1P20700 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LMNB1P20700 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
LMNB1P20700 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LMNB1P20700 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LMNB1P20700 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LMNB1P20700 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
LMNB1P20700 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.11□□□□□ -1.27
LMNB1P20700 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC7.11□□□□□ -1.27
LMNB1P20700 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LMNB1P20700 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LMNB1P20700 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LMNB1P20700 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC7.11□□□□□ -1.27
LMNB1P20700 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.11□□□□□ -1.27
LMNB1P20700 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.11□□□□□ -1.27
LMNB1P20700 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
LMNB1P20700 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LMNB1P20700 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
LMNB1P20700 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC7.11□□□□□ -1.27
LMNB1P20700 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
LMNB1P20700 RNU6ATAC18P-201ENST00000408413 101 ntBASIC7.11□□□□□ -1.27
LMNB1P20700 Y_RNA.604-201ENST00000410574 102 ntBASIC7.11□□□□□ -1.27
LMNB1P20700 FAR2P2-201ENST00000413041 594 ntBASIC7.11□□□□□ -1.27
LMNB1P20700 NPM1P11-201ENST00000417106 855 ntBASIC7.11□□□□□ -1.27
LMNB1P20700 AL133325.1-201ENST00000421090 382 ntBASIC7.11□□□□□ -1.27
LMNB1P20700 FAR2P4-202ENST00000425399 584 ntBASIC7.11□□□□□ -1.27
LMNB1P20700 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC7.11□□□□□ -1.27
LMNB1P20700 FO393419.3-201ENST00000428741 282 ntBASIC7.11□□□□□ -1.27
LMNB1P20700 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.11□□□□□ -1.27
LMNB1P20700 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC7.11□□□□□ -1.27
LMNB1P20700 AC006466.1-201ENST00000438721 289 ntBASIC7.11□□□□□ -1.27
LMNB1P20700 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC7.11□□□□□ -1.27
LMNB1P20700 AC015983.1-201ENST00000441577 373 ntBASIC7.11□□□□□ -1.27
LMNB1P20700 GTF3AP5-201ENST00000442645 697 ntBASIC7.11□□□□□ -1.27
LMNB1P20700 HMGB1P48-201ENST00000446155 598 ntBASIC7.11□□□□□ -1.27
LMNB1P20700 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC7.11□□□□□ -1.27
LMNB1P20700 EIF4A2P4-201ENST00000458691 1196 ntBASIC7.11□□□□□ -1.27
LMNB1P20700 GYG1P1-201ENST00000460864 698 ntBASIC7.11□□□□□ -1.27
LMNB1P20700 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.11□□□□□ -1.27
LMNB1P20700 FTH1P8-201ENST00000498161 514 ntBASIC7.11□□□□□ -1.27
LMNB1P20700 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LMNB1P20700 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
LMNB1P20700 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC7.11□□□□□ -1.27
LMNB1P20700 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC7.11□□□□□ -1.27
LMNB1P20700 OR5AK3P-201ENST00000527486 1297 ntBASIC7.11□□□□□ -1.27
LMNB1P20700 GSTP1P1-201ENST00000548078 319 ntBASIC7.11□□□□□ -1.27
LMNB1P20700 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC7.11□□□□□ -1.27
LMNB1P20700 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC7.11□□□□□ -1.27
LMNB1P20700 MTCO1P40-201ENST00000574371 625 ntBASIC7.11□□□□□ -1.27
LMNB1P20700 TXNP4-201ENST00000575018 310 ntBASIC7.11□□□□□ -1.27
LMNB1P20700 MIR5708-201ENST00000579723 85 ntBASIC7.11□□□□□ -1.27
LMNB1P20700 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC7.11□□□□□ -1.27
LMNB1P20700 MIR4999-201ENST00000585029 91 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms