Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.13□□□□□ -1.59
PCNAP12004 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.13□□□□□ -1.59
PCNAP12004 RN7SKP141-201ENST00000516167 338 ntBASIC5.13□□□□□ -1.59
PCNAP12004 AC018442.3-201ENST00000523025 183 ntBASIC5.13□□□□□ -1.59
PCNAP12004 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.13□□□□□ -1.59
PCNAP12004 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.13□□□□□ -1.59
PCNAP12004 AC087894.1-201ENST00000538359 518 ntBASIC5.13□□□□□ -1.59
PCNAP12004 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.13□□□□□ -1.59
PCNAP12004 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PCNAP12004 SNORD95-201ENST00000579879 68 ntBASIC5.13□□□□□ -1.59
PCNAP12004 PRPF19P1-201ENST00000584766 898 ntBASIC5.13□□□□□ -1.59
PCNAP12004 AC005252.1-201ENST00000604518 1063 ntBASIC5.13□□□□□ -1.59
PCNAP12004 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.13□□□□□ -1.59
PCNAP12004 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.13□□□□□ -1.59
PCNAP12004 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.13□□□□□ -1.59
PCNAP12004 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.13□□□□□ -1.59
PCNAP12004 AC131238.1-201ENST00000617135 328 ntBASIC5.13□□□□□ -1.59
PCNAP12004 AC011815.3-201ENST00000624194 473 ntBASIC5.13□□□□□ -1.59
PCNAP12004 AP001642.1-201ENST00000624727 2117 ntBASIC5.13□□□□□ -1.59
PCNAP12004 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.13□□□□□ -1.59
PCNAP12004 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.13□□□□□ -1.59
PCNAP12004 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.13□□□□□ -1.59
PCNAP12004 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
PCNAP12004 MFSD8-213ENST00000641134 1327 ntBASIC5.13□□□□□ -1.59
PCNAP12004 AC104623.2-202ENST00000623477 4002 ntBASIC5.13□□□□□ -1.59
PCNAP12004 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCNAP12004 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCNAP12004 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.12□□□□□ -1.59
PCNAP12004 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCNAP12004 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.12□□□□□ -1.59
PCNAP12004 RNA5SP335-201ENST00000363817 110 ntBASIC5.12□□□□□ -1.59
PCNAP12004 RNA5SP242-201ENST00000364171 118 ntBASIC5.12□□□□□ -1.59
PCNAP12004 HMGB3P19-201ENST00000403971 560 ntBASIC5.12□□□□□ -1.59
PCNAP12004 AL034374.1-201ENST00000406329 351 ntBASIC5.12□□□□□ -1.59
PCNAP12004 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.12□□□□□ -1.59
PCNAP12004 AC096533.1-201ENST00000411645 353 ntBASIC5.12□□□□□ -1.59
PCNAP12004 Z68694.1-201ENST00000413929 841 ntBASIC5.12□□□□□ -1.59
PCNAP12004 AC008173.1-201ENST00000418901 264 ntBASIC5.12□□□□□ -1.59
PCNAP12004 AC023128.2-201ENST00000420880 1223 ntBASIC5.12□□□□□ -1.59
PCNAP12004 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.12□□□□□ -1.59
PCNAP12004 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.12□□□□□ -1.59
PCNAP12004 AC004854.1-201ENST00000440356 349 ntBASIC5.12□□□□□ -1.59
PCNAP12004 HMGB3P9-201ENST00000441799 583 ntBASIC5.12□□□□□ -1.59
PCNAP12004 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCNAP12004 GAPDHP25-201ENST00000447061 1001 ntBASIC5.12□□□□□ -1.59
PCNAP12004 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.12□□□□□ -1.59
PCNAP12004 RPS27AP2-201ENST00000457576 465 ntBASIC5.12□□□□□ -1.59
PCNAP12004 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.12□□□□□ -1.59
PCNAP12004 RN7SL273P-201ENST00000481561 299 ntBASIC5.12□□□□□ -1.59
PCNAP12004 EIF1P7-201ENST00000487533 337 ntBASIC5.12□□□□□ -1.59
PCNAP12004 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.12□□□□□ -1.59
PCNAP12004 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.12□□□□□ -1.59
PCNAP12004 RPS12P31-201ENST00000491419 398 ntBASIC5.12□□□□□ -1.59
PCNAP12004 AL049874.2-201ENST00000492636 288 ntBASIC5.12□□□□□ -1.59
PCNAP12004 MYL12BP2-201ENST00000503948 512 ntBASIC5.12□□□□□ -1.59
PCNAP12004 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.12□□□□□ -1.59
PCNAP12004 AC098976.1-201ENST00000513014 541 ntBASIC5.12□□□□□ -1.59
PCNAP12004 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.12□□□□□ -1.59
PCNAP12004 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.12□□□□□ -1.59
PCNAP12004 YWHABP2-201ENST00000540201 713 ntBASIC5.12□□□□□ -1.59
PCNAP12004 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCNAP12004 SULT1C2P2-201ENST00000562517 294 ntBASIC5.12□□□□□ -1.59
PCNAP12004 AC127024.5-201ENST00000580085 462 ntBASIC5.12□□□□□ -1.59
PCNAP12004 RN7SL339P-201ENST00000580597 296 ntBASIC5.12□□□□□ -1.59
PCNAP12004 AP000919.1-202ENST00000581139 1264 ntBASIC5.12□□□□□ -1.59
PCNAP12004 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.12□□□□□ -1.59
PCNAP12004 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.12□□□□□ -1.59
PCNAP12004 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.12□□□□□ -1.59
PCNAP12004 SUGT1P3-202ENST00000604259 383 ntBASIC5.12□□□□□ -1.59
PCNAP12004 AL589674.2-201ENST00000604304 337 ntBASIC5.12□□□□□ -1.59
PCNAP12004 AC124016.2-201ENST00000610058 665 ntBASIC5.12□□□□□ -1.59
PCNAP12004 AC005840.5-201ENST00000619166 599 ntBASIC5.12□□□□□ -1.59
PCNAP12004 AC091046.2-201ENST00000620775 665 ntBASIC5.12□□□□□ -1.59
PCNAP12004 AC013437.2-201ENST00000639587 677 ntBASIC5.12□□□□□ -1.59
PCNAP12004 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PCNAP12004 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PCNAP12004 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
PCNAP12004 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.12□□□□□ -1.59
PCNAP12004 VPS35P1-201ENST00000563400 1518 ntBASIC5.12□□□□□ -1.59
PCNAP12004 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCNAP12004 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCNAP12004 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.12□□□□□ -1.59
PCNAP12004 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
PCNAP12004 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.12□□□□□ -1.59
PCNAP12004 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCNAP12004 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCNAP12004 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCNAP12004 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCNAP12004 Z95327.2-201ENST00000414579 1873 ntBASIC5.11□□□□□ -1.59
PCNAP12004 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PCNAP12004 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCNAP12004 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCNAP12004 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PCNAP12004 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
PCNAP12004 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCNAP12004 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCNAP12004 MIR323A-201ENST00000362199 86 ntBASIC5.11□□□□□ -1.59
PCNAP12004 SNORD56.4-201ENST00000363883 71 ntBASIC5.11□□□□□ -1.59
PCNAP12004 RN7SKP153-201ENST00000365026 316 ntBASIC5.11□□□□□ -1.59
PCNAP12004 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms