Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.88□□□□□ -1.63
RIPK2O43353 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.88□□□□□ -1.63
RIPK2O43353 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.88□□□□□ -1.63
RIPK2O43353 AC093249.4-201ENST00000564755 259 ntBASIC4.88□□□□□ -1.63
RIPK2O43353 ADAM3B-201ENST00000569937 840 ntBASIC4.88□□□□□ -1.63
RIPK2O43353 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RIPK2O43353 RN7SL176P-201ENST00000580352 264 ntBASIC4.88□□□□□ -1.63
RIPK2O43353 AC010424.2-201ENST00000607594 443 ntBASIC4.88□□□□□ -1.63
RIPK2O43353 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.88□□□□□ -1.63
RIPK2O43353 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.88□□□□□ -1.63
RIPK2O43353 AC127024.6-201ENST00000621598 424 ntBASIC4.88□□□□□ -1.63
RIPK2O43353 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.88□□□□□ -1.63
RIPK2O43353 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RIPK2O43353 AC022893.2-201ENST00000564832 3296 ntBASIC4.88□□□□□ -1.63
RIPK2O43353 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RIPK2O43353 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RIPK2O43353 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RIPK2O43353 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RIPK2O43353 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RIPK2O43353 AL049555.1-201ENST00000562834 1933 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RIPK2O43353 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RIPK2O43353 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RIPK2O43353 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RIPK2O43353 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RIPK2O43353 HSPD1P14-201ENST00000432666 1618 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 MAPK10-303ENST00000641324 3959 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.87□□□□□ -1.63
RIPK2O43353 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RIPK2O43353 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RIPK2O43353 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RIPK2O43353 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RIPK2O43353 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RIPK2O43353 OR56B2P-201ENST00000317102 954 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 TMSB4XP4-201ENST00000323496 618 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 RNU6-670P-201ENST00000364312 104 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 VN1R12P-201ENST00000403778 876 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 HDGFP1-201ENST00000405943 252 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 VDAC1P9-201ENST00000412766 841 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 RPL21P108-201ENST00000413857 481 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 RPS26P13-201ENST00000419030 330 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.87□□□□□ -1.63
RIPK2O43353 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RIPK2O43353 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.87□□□□□ -1.63
RIPK2O43353 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.87□□□□□ -1.63
RIPK2O43353 AL161636.2-201ENST00000445179 927 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.87□□□□□ -1.63
RIPK2O43353 PSMC1P13-201ENST00000458195 985 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 RPL5P13-201ENST00000462840 709 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 MTND6P6-201ENST00000478031 263 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 AC147055.1-201ENST00000509261 750 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 COX6B1P5-201ENST00000509843 249 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 HMGB1P19-201ENST00000517578 577 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.87□□□□□ -1.63
RIPK2O43353 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.87□□□□□ -1.63
RIPK2O43353 OR7E128P-201ENST00000532736 1024 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.87□□□□□ -1.63
RIPK2O43353 AC084757.1-201ENST00000559987 490 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.87□□□□□ -1.63
RIPK2O43353 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.87□□□□□ -1.63
RIPK2O43353 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.87□□□□□ -1.63
RIPK2O43353 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.87□□□□□ -1.63
RIPK2O43353 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RIPK2O43353 AC099494.2-201ENST00000623371 978 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.87□□□□□ -1.63
RIPK2O43353 AC119674.1-212ENST00000641155 993 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RIPK2O43353 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.87□□□□□ -1.63
RIPK2O43353 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.87□□□□□ -1.63
RIPK2O43353 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RIPK2O43353 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.87□□□□□ -1.63
RIPK2O43353 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RIPK2O43353 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.87□□□□□ -1.63
RIPK2O43353 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RIPK2O43353 AC091046.3-201ENST00000631455 1574 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 AC017104.4-201ENST00000636283 1592 ntBASIC4.87□□□□□ -1.63
RIPK2O43353 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK2O43353 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.86□□□□□ -1.63
RIPK2O43353 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK2O43353 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK2O43353 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK2O43353 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK2O43353 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK2O43353 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK2O43353 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RIPK2O43353 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK2O43353 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.86□□□□□ -1.63
RIPK2O43353 RNU6-891P-201ENST00000384280 111 ntBASIC4.86□□□□□ -1.63
RIPK2O43353 MIR320B1-201ENST00000390209 79 ntBASIC4.86□□□□□ -1.63
RIPK2O43353 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.86□□□□□ -1.63
RIPK2O43353 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.86□□□□□ -1.63
RIPK2O43353 RN7SKP293-201ENST00000411389 296 ntBASIC4.86□□□□□ -1.63
RIPK2O43353 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.86□□□□□ -1.63
RIPK2O43353 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.86□□□□□ -1.63
RIPK2O43353 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.86□□□□□ -1.63
RIPK2O43353 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.86□□□□□ -1.63
RIPK2O43353 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.86□□□□□ -1.63
RIPK2O43353 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.86□□□□□ -1.63
RIPK2O43353 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms