Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RPL21P71-201ENST00000465598 459 ntBASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 AC026336.1-201ENST00000466577 351 ntBASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 AC110792.2-201ENST00000510278 224 ntBASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 AC008429.2-201ENST00000523057 864 ntBASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 AC131935.1-201ENST00000524621 333 ntBASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 SAA3P-201ENST00000533267 365 ntBASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 AL355836.1-201ENST00000555951 870 ntBASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 MT1B-202ENST00000562399 351 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 AL158196.1-201ENST00000616786 434 ntBASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 SRP54-214ENST00000630962 162 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHB11Q9Y5F2 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 ERCC6-202ENST00000374127 1782 ntBASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 Y_RNA.128-201ENST00000363391 112 ntBASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 RPL7P25-201ENST00000404151 721 ntBASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 RNU2-28P-201ENST00000410457 189 ntBASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AL136380.1-201ENST00000447970 162 ntBASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 RPLP0P1-201ENST00000457002 361 ntBASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 CHCHD2P7-201ENST00000508008 452 ntBASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 SNORA40.12-201ENST00000516329 111 ntBASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AC087241.2-201ENST00000535801 324 ntBASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AC023050.3-201ENST00000541142 333 ntBASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AC090502.2-201ENST00000549267 280 ntBASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AL109628.1-201ENST00000556877 366 ntBASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AC009117.1-201ENST00000563948 554 ntBASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 RN7SL366P-201ENST00000577957 292 ntBASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 MTCYBP13-201ENST00000578634 1093 ntBASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AC015801.1-201ENST00000585651 153 ntBASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AC011497.2-201ENST00000600255 639 ntBASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AL031658.2-201ENST00000616850 651 ntBASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AC068831.8-201ENST00000620171 435 ntBASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AC130448.2-201ENST00000624082 374 ntBASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 AC099654.6-201ENST00000636487 512 ntBASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms