Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 SOX5P1-201ENST00000524155 1127 ntBASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 MTATP6P2-201ENST00000603319 678 ntBASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 AC112503.2-201ENST00000609005 552 ntBASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 AL118522.2-201ENST00000616045 615 ntBASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 FRG1HP-204ENST00000617940 757 ntBASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 AC011447.7-201ENST00000624228 1590 ntBASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
PCDHGB4Q9UN71 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 OR9G4-201ENST00000302957 984 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 RN7SKP224-201ENST00000364140 325 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 RNA5SP284-201ENST00000384547 118 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 RNU6-146P-201ENST00000384602 108 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 DBIP1-201ENST00000401435 260 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 SNORA11.3-201ENST00000408471 128 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 MIR1282-201ENST00000408865 101 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 SDHDP6-201ENST00000414693 480 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AC008173.1-201ENST00000418901 264 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AC093155.2-201ENST00000420734 937 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 FMO7P-201ENST00000436045 768 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 RPS11P7-201ENST00000442125 465 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 ARL5AP2-201ENST00000444698 533 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AC105399.1-202ENST00000447303 205 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 RN7SL51P-201ENST00000468230 285 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AC007998.1-201ENST00000474156 672 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 RNU6-941P-201ENST00000516346 108 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 SMARCE1P4-201ENST00000523647 241 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 OR8A2P-201ENST00000528631 952 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AL049830.4-201ENST00000555149 351 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AC090079.2-201ENST00000575289 768 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AC005252.1-201ENST00000604518 1063 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AC245100.7-201ENST00000609678 442 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 RMST_10.1-201ENST00000616309 154 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 STMN1P1-201ENST00000617809 440 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 SNORA11.6-201ENST00000619030 128 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AC093875.1-201ENST00000623688 504 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AC092162.3-201ENST00000624511 1624 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 HSPA8P19-201ENST00000505359 1517 ntBASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHGB4Q9UN71 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGB4Q9UN71 VN2R3P-201ENST00000422626 1412 ntBASIC5.06□□□□□ -1.6
PCDHGB4Q9UN71 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGB4Q9UN71 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGB4Q9UN71 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms