Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 AL590704.1-201ENST00000402856 794 ntBASIC4.62□□□□□ -1.67
CHD7Q9P2D1 TCEA1P4-201ENST00000415066 844 ntBASIC4.62□□□□□ -1.67
CHD7Q9P2D1 AL035246.1-201ENST00000433554 1255 ntBASIC4.62□□□□□ -1.67
CHD7Q9P2D1 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 AC010460.1-201ENST00000507087 466 ntBASIC4.62□□□□□ -1.67
CHD7Q9P2D1 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 AC090912.3-201ENST00000609775 533 ntBASIC4.62□□□□□ -1.67
CHD7Q9P2D1 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 AC092162.1-201ENST00000432828 434 ntBASIC4.62□□□□□ -1.67
CHD7Q9P2D1 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 RN7SL197P-201ENST00000466981 299 ntBASIC4.62□□□□□ -1.67
CHD7Q9P2D1 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CHD7Q9P2D1 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 AP000907.1-201ENST00000428428 510 ntBASIC4.61□□□□□ -1.67
CHD7Q9P2D1 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 DYNLL1P4-201ENST00000549314 266 ntBASIC4.61□□□□□ -1.67
CHD7Q9P2D1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 LINC01808-202ENST00000641680 1116 ntBASIC4.61□□□□□ -1.67
CHD7Q9P2D1 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 AC009779.8-201ENST00000641684 4384 ntBASIC4.61□□□□□ -1.67
CHD7Q9P2D1 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 AC104581.5-201ENST00000624171 7141 ntBASIC4.61□□□□□ -1.67
CHD7Q9P2D1 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 MRPS21P3-201ENST00000436696 262 ntBASIC4.61□□□□□ -1.67
CHD7Q9P2D1 UBE2V1P3-201ENST00000439651 417 ntBASIC4.61□□□□□ -1.67
CHD7Q9P2D1 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 ABCF2P2-201ENST00000450549 296 ntBASIC4.61□□□□□ -1.67
CHD7Q9P2D1 RPL23AP53-201ENST00000521854 457 ntBASIC4.61□□□□□ -1.67
CHD7Q9P2D1 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 AP000619.3-201ENST00000535634 1127 ntBASIC4.61□□□□□ -1.67
CHD7Q9P2D1 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 Z95327.3-201ENST00000610385 572 ntBASIC4.61□□□□□ -1.67
CHD7Q9P2D1 AL356121.2-201ENST00000624715 780 ntBASIC4.61□□□□□ -1.67
CHD7Q9P2D1 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHD7Q9P2D1 PCAT14-202ENST00000627127 3935 ntBASIC4.6□□□□□ -1.67
CHD7Q9P2D1 AL445487.1-201ENST00000415694 1580 ntBASIC4.6□□□□□ -1.67
CHD7Q9P2D1 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHD7Q9P2D1 COX5BP7-201ENST00000414780 274 ntBASIC4.6□□□□□ -1.67
CHD7Q9P2D1 AC114495.1-201ENST00000441274 436 ntBASIC4.6□□□□□ -1.67
CHD7Q9P2D1 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.6□□□□□ -1.67
CHD7Q9P2D1 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CHD7Q9P2D1 AC016550.3-201ENST00000515706 767 ntBASIC4.6□□□□□ -1.67
CHD7Q9P2D1 RNU1-103P-201ENST00000516502 125 ntBASIC4.6□□□□□ -1.67
CHD7Q9P2D1 PAICSP4-201ENST00000517543 1253 ntBASIC4.6□□□□□ -1.67
CHD7Q9P2D1 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
CHD7Q9P2D1 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.6□□□□□ -1.67
CHD7Q9P2D1 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CHD7Q9P2D1 AL391261.4-201ENST00000616012 481 ntBASIC4.6□□□□□ -1.67
CHD7Q9P2D1 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHD7Q9P2D1 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHD7Q9P2D1 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CHD7Q9P2D1 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHD7Q9P2D1 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
CHD7Q9P2D1 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHD7Q9P2D1 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHD7Q9P2D1 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CHD7Q9P2D1 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.6□□□□□ -1.67
CHD7Q9P2D1 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.6□□□□□ -1.67
CHD7Q9P2D1 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.6□□□□□ -1.67
CHD7Q9P2D1 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.6□□□□□ -1.67
CHD7Q9P2D1 AC008013.2-202ENST00000637965 364 ntBASIC4.6□□□□□ -1.67
CHD7Q9P2D1 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.6□□□□□ -1.67
CHD7Q9P2D1 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHD7Q9P2D1 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHD7Q9P2D1 ZFRP1-201ENST00000457579 2970 ntBASIC4.6□□□□□ -1.67
CHD7Q9P2D1 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHD7Q9P2D1 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHD7Q9P2D1 MIR7-3-201ENST00000384898 110 ntBASIC4.59□□□□□ -1.67
CHD7Q9P2D1 KRR1P1-201ENST00000419430 803 ntBASIC4.59□□□□□ -1.67
CHD7Q9P2D1 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
CHD7Q9P2D1 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.59□□□□□ -1.67
CHD7Q9P2D1 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms