Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 LRRC37BP1-201ENST00000398851 714 ntBASIC4.37□□□□□ -1.71
CHD8Q9HCK8 RNA5SP293-201ENST00000410527 113 ntBASIC4.37□□□□□ -1.71
CHD8Q9HCK8 TMA16P2-201ENST00000413187 601 ntBASIC4.37□□□□□ -1.71
CHD8Q9HCK8 AP000907.1-201ENST00000428428 510 ntBASIC4.37□□□□□ -1.71
CHD8Q9HCK8 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 RPS24P16-201ENST00000497294 392 ntBASIC4.37□□□□□ -1.71
CHD8Q9HCK8 SOD1P3-201ENST00000518682 454 ntBASIC4.37□□□□□ -1.71
CHD8Q9HCK8 AL442067.2-201ENST00000614033 363 ntBASIC4.37□□□□□ -1.71
CHD8Q9HCK8 AL133243.1-201ENST00000614487 366 ntBASIC4.37□□□□□ -1.71
CHD8Q9HCK8 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 AC009229.4-201ENST00000623854 1947 ntBASIC4.37□□□□□ -1.71
CHD8Q9HCK8 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 ABCC13-202ENST00000463099 3842 ntBASIC4.37□□□□□ -1.71
CHD8Q9HCK8 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 AL355834.1-201ENST00000556602 3965 ntBASIC4.37□□□□□ -1.71
CHD8Q9HCK8 SOCS5P3-201ENST00000425115 1576 ntBASIC4.37□□□□□ -1.71
CHD8Q9HCK8 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 RPL21P65-201ENST00000406094 466 ntBASIC4.37□□□□□ -1.71
CHD8Q9HCK8 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 AL445584.1-201ENST00000431451 330 ntBASIC4.37□□□□□ -1.71
CHD8Q9HCK8 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 AC053481.1-201ENST00000467217 306 ntBASIC4.37□□□□□ -1.71
CHD8Q9HCK8 AC004924.1-201ENST00000480160 781 ntBASIC4.37□□□□□ -1.71
CHD8Q9HCK8 RN7SL441P-201ENST00000492388 296 ntBASIC4.37□□□□□ -1.71
CHD8Q9HCK8 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 AC005255.1-201ENST00000593748 216 ntBASIC4.37□□□□□ -1.71
CHD8Q9HCK8 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 AL353729.2-201ENST00000605859 1249 ntBASIC4.37□□□□□ -1.71
CHD8Q9HCK8 MIR6839-201ENST00000620425 113 ntBASIC4.37□□□□□ -1.71
CHD8Q9HCK8 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 Z95114.1-201ENST00000624264 14574 ntBASIC4.37□□□□□ -1.71
CHD8Q9HCK8 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CHD8Q9HCK8 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 Y_RNA.466-201ENST00000384294 113 ntBASIC4.36□□□□□ -1.71
CHD8Q9HCK8 AL079342.1-201ENST00000401460 267 ntBASIC4.36□□□□□ -1.71
CHD8Q9HCK8 EIF2S2P5-201ENST00000457635 968 ntBASIC4.36□□□□□ -1.71
CHD8Q9HCK8 AC007688.1-201ENST00000475592 759 ntBASIC4.36□□□□□ -1.71
CHD8Q9HCK8 AC023818.1-201ENST00000498379 384 ntBASIC4.36□□□□□ -1.71
CHD8Q9HCK8 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 AC009093.8-201ENST00000641769 292 ntBASIC4.36□□□□□ -1.71
CHD8Q9HCK8 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 ZNF137P-201ENST00000456718 1920 ntBASIC4.36□□□□□ -1.71
CHD8Q9HCK8 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 OR51H2P-202ENST00000641424 3046 ntBASIC4.36□□□□□ -1.71
CHD8Q9HCK8 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 IL6STP1-201ENST00000346911 1020 ntBASIC4.36□□□□□ -1.71
CHD8Q9HCK8 SNORA73.2-201ENST00000364946 201 ntBASIC4.36□□□□□ -1.71
CHD8Q9HCK8 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 AC013412.1-201ENST00000610687 192 ntBASIC4.36□□□□□ -1.71
CHD8Q9HCK8 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC4.36□□□□□ -1.71
CHD8Q9HCK8 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 ZNF285B-201ENST00000561698 1767 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms