Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HPS3Q969F9 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HPS3Q969F9 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
HPS3Q969F9 AC004158.1-201ENST00000564508 4319 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HPS3Q969F9 CR788268.1-201ENST00000603931 1809 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 AL034549.2-201ENST00000618285 3373 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HPS3Q969F9 MIR133B-201ENST00000362210 119 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.98□□□□□ -1.45
HPS3Q969F9 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
HPS3Q969F9 DBIP1-201ENST00000401435 260 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
HPS3Q969F9 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.98□□□□□ -1.45
HPS3Q969F9 SDHDP6-201ENST00000414693 480 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 PCNPP4-201ENST00000414817 517 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 LINC01881-201ENST00000416103 412 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HPS3Q969F9 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HPS3Q969F9 BRWD1P3-201ENST00000428816 390 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HPS3Q969F9 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.98□□□□□ -1.45
HPS3Q969F9 AL591719.1-201ENST00000444669 744 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.98□□□□□ -1.45
HPS3Q969F9 AL050341.1-201ENST00000447743 313 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.98□□□□□ -1.45
HPS3Q969F9 SEPT7P3-201ENST00000455017 621 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.98□□□□□ -1.45
HPS3Q969F9 RPS27AP2-201ENST00000457576 465 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 AC092754.1-201ENST00000472975 479 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.98□□□□□ -1.45
HPS3Q969F9 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.98□□□□□ -1.45
HPS3Q969F9 AC104108.1-201ENST00000509930 412 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 IMPA1P1-201ENST00000510718 842 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 RPL7L1P4-201ENST00000513004 707 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.98□□□□□ -1.45
HPS3Q969F9 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.98□□□□□ -1.45
HPS3Q969F9 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.98□□□□□ -1.45
HPS3Q969F9 LRRC34P1-201ENST00000542742 915 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HPS3Q969F9 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.98□□□□□ -1.45
HPS3Q969F9 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.98□□□□□ -1.45
HPS3Q969F9 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.98□□□□□ -1.45
HPS3Q969F9 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.98□□□□□ -1.45
HPS3Q969F9 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HPS3Q969F9 AC125494.3-201ENST00000602759 455 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 AC090525.3-201ENST00000605601 189 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 AC024060.1-201ENST00000607052 494 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 MIR6826-201ENST00000617808 98 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 STMN1P1-201ENST00000617809 440 ntBASIC5.98□□□□□ -1.45
HPS3Q969F9 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HPS3Q969F9 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
HPS3Q969F9 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
HPS3Q969F9 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HPS3Q969F9 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HPS3Q969F9 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HPS3Q969F9 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
HPS3Q969F9 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HPS3Q969F9 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HPS3Q969F9 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
HPS3Q969F9 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HPS3Q969F9 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.97□□□□□ -1.45
HPS3Q969F9 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
HPS3Q969F9 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HPS3Q969F9 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
HPS3Q969F9 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HPS3Q969F9 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HPS3Q969F9 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HPS3Q969F9 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.97□□□□□ -1.45
HPS3Q969F9 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
HPS3Q969F9 TAS2R15P-201ENST00000390674 928 ntBASIC5.97□□□□□ -1.45
HPS3Q969F9 RNU1-77P-201ENST00000390868 162 ntBASIC5.97□□□□□ -1.45
HPS3Q969F9 AL021331.1-201ENST00000402817 582 ntBASIC5.97□□□□□ -1.45
HPS3Q969F9 GPS2P1-201ENST00000411761 986 ntBASIC5.97□□□□□ -1.45
HPS3Q969F9 Z93019.1-201ENST00000416450 973 ntBASIC5.97□□□□□ -1.45
HPS3Q969F9 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.97□□□□□ -1.45
HPS3Q969F9 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.97□□□□□ -1.45
HPS3Q969F9 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.97□□□□□ -1.45
HPS3Q969F9 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.97□□□□□ -1.45
HPS3Q969F9 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.97□□□□□ -1.45
HPS3Q969F9 AC002542.1-201ENST00000440683 193 ntBASIC5.97□□□□□ -1.45
HPS3Q969F9 RPL31P44-201ENST00000447680 377 ntBASIC5.97□□□□□ -1.45
HPS3Q969F9 AC023141.9-201ENST00000458734 412 ntBASIC5.97□□□□□ -1.45
HPS3Q969F9 PSAT1P4-201ENST00000466500 526 ntBASIC5.97□□□□□ -1.45
HPS3Q969F9 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.97□□□□□ -1.45
HPS3Q969F9 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HPS3Q969F9 RN7SL177P-201ENST00000476596 299 ntBASIC5.97□□□□□ -1.45
HPS3Q969F9 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.97□□□□□ -1.45
HPS3Q969F9 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.97□□□□□ -1.45
HPS3Q969F9 AC021193.1-201ENST00000511607 420 ntBASIC5.97□□□□□ -1.45
HPS3Q969F9 AC119751.1-201ENST00000513357 765 ntBASIC5.97□□□□□ -1.45
HPS3Q969F9 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.97□□□□□ -1.45
HPS3Q969F9 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.97□□□□□ -1.45
HPS3Q969F9 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.97□□□□□ -1.45
HPS3Q969F9 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.97□□□□□ -1.45
HPS3Q969F9 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.97□□□□□ -1.45
HPS3Q969F9 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.97□□□□□ -1.45
HPS3Q969F9 AC090022.1-201ENST00000546569 311 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms