Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 LINC00410-201ENST00000419272 2018 ntTSL 2 BASIC7.5□□□□□ -1.21
HLA-CQ95604 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC7.5□□□□□ -1.21
HLA-CQ95604 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 AC006116.1-201ENST00000587908 2171 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC7.5□□□□□ -1.21
HLA-CQ95604 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
HLA-CQ95604 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
HLA-CQ95604 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
HLA-CQ95604 OFD1P17-201ENST00000437639 3018 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
HLA-CQ95604 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
HLA-CQ95604 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC7.49□□□□□ -1.21
HLA-CQ95604 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
HLA-CQ95604 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
HLA-CQ95604 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
HLA-CQ95604 AC011369.1-201ENST00000517408 2181 ntTSL 3 BASIC7.49□□□□□ -1.21
HLA-CQ95604 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
HLA-CQ95604 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
HLA-CQ95604 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC7.49□□□□□ -1.21
HLA-CQ95604 RNA5SP472-201ENST00000363868 119 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 RNU6-784P-201ENST00000384330 106 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 MIR1302-3-201ENST00000408128 138 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC7.49□□□□□ -1.21
HLA-CQ95604 RPL34P3-201ENST00000421454 338 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 CBX3P6-201ENST00000430257 527 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC7.49□□□□□ -1.21
HLA-CQ95604 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.49□□□□□ -1.21
HLA-CQ95604 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC7.49□□□□□ -1.21
HLA-CQ95604 HSPE1P28-201ENST00000443139 211 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.49□□□□□ -1.21
HLA-CQ95604 SBDSP1-204ENST00000453858 737 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC7.49□□□□□ -1.21
HLA-CQ95604 RPSAP7-201ENST00000456871 885 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.49□□□□□ -1.21
HLA-CQ95604 RN7SL390P-201ENST00000470634 284 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC7.49□□□□□ -1.21
HLA-CQ95604 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC7.49□□□□□ -1.21
HLA-CQ95604 AC012181.1-201ENST00000479895 423 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC7.49□□□□□ -1.21
HLA-CQ95604 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC7.49□□□□□ -1.21
HLA-CQ95604 AC112484.3-201ENST00000505910 329 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC7.49□□□□□ -1.21
HLA-CQ95604 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.49□□□□□ -1.21
HLA-CQ95604 AC017037.2-201ENST00000513850 890 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 GLYATL1P4-201ENST00000529326 906 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC7.49□□□□□ -1.21
HLA-CQ95604 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.49□□□□□ -1.21
HLA-CQ95604 AL389895.1-201ENST00000554127 252 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 AL845552.1-201ENST00000556820 323 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC7.49□□□□□ -1.21
HLA-CQ95604 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC7.49□□□□□ -1.21
HLA-CQ95604 MIR4437-201ENST00000581331 60 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 MIR4443-201ENST00000585052 53 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 MIR6721-201ENST00000617181 87 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 U4.1-201ENST00000620349 87 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 AC005514.1-201ENST00000623521 208 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 AC145207.9-201ENST00000623802 325 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC7.49□□□□□ -1.21
HLA-CQ95604 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.49□□□□□ -1.21
HLA-CQ95604 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
HLA-CQ95604 AC006269.1-201ENST00000636752 2789 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
HLA-CQ95604 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
HLA-CQ95604 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
HLA-CQ95604 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC7.49□□□□□ -1.21
HLA-CQ95604 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC7.49□□□□□ -1.21
HLA-CQ95604 AC105074.1-201ENST00000623380 3095 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 AL049780.3-201ENST00000624612 1583 ntBASIC7.49□□□□□ -1.21
HLA-CQ95604 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
HLA-CQ95604 RFX3-202ENST00000358730 2971 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
HLA-CQ95604 AC106869.1-203ENST00000419035 1892 ntTSL 2 BASIC7.49□□□□□ -1.21
HLA-CQ95604 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.49□□□□□ -1.21
HLA-CQ95604 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
HLA-CQ95604 MSL3P1-201ENST00000438684 2032 ntTSL 2 BASIC7.49□□□□□ -1.21
HLA-CQ95604 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC7.49□□□□□ -1.21
HLA-CQ95604 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
HLA-CQ95604 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
HLA-CQ95604 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
HLA-CQ95604 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
HLA-CQ95604 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
HLA-CQ95604 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
HLA-CQ95604 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
HLA-CQ95604 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
HLA-CQ95604 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
HLA-CQ95604 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.48□□□□□ -1.21
HLA-CQ95604 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
HLA-CQ95604 RNU6-606P-201ENST00000384721 111 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 MIR568-201ENST00000385036 95 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
HLA-CQ95604 AL359634.1-202ENST00000404721 284 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
HLA-CQ95604 PMCHL1-202ENST00000423102 261 ntBASIC7.48□□□□□ -1.21
HLA-CQ95604 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.48□□□□□ -1.21
HLA-CQ95604 AL049734.2-201ENST00000441066 616 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms