Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.09□□□□□ -1.59
CASP4P49662 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.09□□□□□ -1.59
CASP4P49662 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.09□□□□□ -1.59
CASP4P49662 OR7A19P-201ENST00000608051 733 ntBASIC5.09□□□□□ -1.59
CASP4P49662 AC100827.5-201ENST00000615883 426 ntBASIC5.09□□□□□ -1.59
CASP4P49662 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.09□□□□□ -1.59
CASP4P49662 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CASP4P49662 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.09□□□□□ -1.59
CASP4P49662 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CASP4P49662 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.09□□□□□ -1.59
CASP4P49662 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CASP4P49662 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
CASP4P49662 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CASP4P49662 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CASP4P49662 MTND5P23-201ENST00000430812 1655 ntBASIC5.08□□□□□ -1.6
CASP4P49662 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.08□□□□□ -1.6
CASP4P49662 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CASP4P49662 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.08□□□□□ -1.6
CASP4P49662 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CASP4P49662 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.08□□□□□ -1.6
CASP4P49662 RN7SKP103-201ENST00000363848 320 ntBASIC5.08□□□□□ -1.6
CASP4P49662 VN1R31P-201ENST00000417498 730 ntBASIC5.08□□□□□ -1.6
CASP4P49662 BX510359.2-201ENST00000417920 305 ntBASIC5.08□□□□□ -1.6
CASP4P49662 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.08□□□□□ -1.6
CASP4P49662 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CASP4P49662 AC073648.4-201ENST00000442655 781 ntBASIC5.08□□□□□ -1.6
CASP4P49662 H2AFZP5-201ENST00000446960 382 ntBASIC5.08□□□□□ -1.6
CASP4P49662 CYCSP34-201ENST00000458172 304 ntBASIC5.08□□□□□ -1.6
CASP4P49662 RPL12P20-201ENST00000475538 479 ntBASIC5.08□□□□□ -1.6
CASP4P49662 AC025164.1-201ENST00000496249 478 ntBASIC5.08□□□□□ -1.6
CASP4P49662 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CASP4P49662 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.08□□□□□ -1.6
CASP4P49662 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.08□□□□□ -1.6
CASP4P49662 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.08□□□□□ -1.6
CASP4P49662 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.08□□□□□ -1.6
CASP4P49662 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.08□□□□□ -1.6
CASP4P49662 COX6CP4-201ENST00000605798 228 ntBASIC5.08□□□□□ -1.6
CASP4P49662 AP005212.4-201ENST00000614206 710 ntBASIC5.08□□□□□ -1.6
CASP4P49662 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CASP4P49662 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CASP4P49662 SDAD1P1-202ENST00000524156 2051 ntBASIC5.08□□□□□ -1.6
CASP4P49662 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CASP4P49662 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.07□□□□□ -1.6
CASP4P49662 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.07□□□□□ -1.6
CASP4P49662 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CASP4P49662 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.07□□□□□ -1.6
CASP4P49662 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CASP4P49662 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CASP4P49662 OR56B2P-201ENST00000317102 954 ntBASIC5.07□□□□□ -1.6
CASP4P49662 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CASP4P49662 AL359643.1-201ENST00000404109 423 ntBASIC5.07□□□□□ -1.6
CASP4P49662 AC096644.3-201ENST00000416788 338 ntBASIC5.07□□□□□ -1.6
CASP4P49662 ATG4AP1-201ENST00000416893 538 ntBASIC5.07□□□□□ -1.6
CASP4P49662 PTP4A1P1-201ENST00000420539 515 ntBASIC5.07□□□□□ -1.6
CASP4P49662 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.07□□□□□ -1.6
CASP4P49662 AC016831.4-201ENST00000438302 307 ntBASIC5.07□□□□□ -1.6
CASP4P49662 RPS26P2-201ENST00000440331 348 ntBASIC5.07□□□□□ -1.6
CASP4P49662 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.07□□□□□ -1.6
CASP4P49662 AC239798.3-201ENST00000454459 408 ntBASIC5.07□□□□□ -1.6
CASP4P49662 RPS4XP18-201ENST00000495480 763 ntBASIC5.07□□□□□ -1.6
CASP4P49662 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.07□□□□□ -1.6
CASP4P49662 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.07□□□□□ -1.6
CASP4P49662 RFPL4AP5-201ENST00000514977 504 ntBASIC5.07□□□□□ -1.6
CASP4P49662 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.07□□□□□ -1.6
CASP4P49662 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.07□□□□□ -1.6
CASP4P49662 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.07□□□□□ -1.6
CASP4P49662 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CASP4P49662 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.07□□□□□ -1.6
CASP4P49662 AC068993.1-201ENST00000546724 589 ntBASIC5.07□□□□□ -1.6
CASP4P49662 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.07□□□□□ -1.6
CASP4P49662 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.07□□□□□ -1.6
CASP4P49662 AC084759.1-201ENST00000561168 290 ntBASIC5.07□□□□□ -1.6
CASP4P49662 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.07□□□□□ -1.6
CASP4P49662 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.07□□□□□ -1.6
CASP4P49662 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.07□□□□□ -1.6
CASP4P49662 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.07□□□□□ -1.6
CASP4P49662 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.07□□□□□ -1.6
CASP4P49662 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CASP4P49662 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.07□□□□□ -1.6
CASP4P49662 TMEM30CP-203ENST00000637814 1035 ntBASIC5.07□□□□□ -1.6
CASP4P49662 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CASP4P49662 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CASP4P49662 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CASP4P49662 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CASP4P49662 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.07□□□□□ -1.6
CASP4P49662 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CASP4P49662 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CASP4P49662 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CASP4P49662 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CASP4P49662 AC135352.1-201ENST00000506173 1418 ntBASIC5.06□□□□□ -1.6
CASP4P49662 AL355852.1-201ENST00000454081 1771 ntBASIC5.06□□□□□ -1.6
CASP4P49662 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CASP4P49662 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CASP4P49662 BTBD10P1-201ENST00000549824 1352 ntBASIC5.06□□□□□ -1.6
CASP4P49662 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.06□□□□□ -1.6
CASP4P49662 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.06□□□□□ -1.6
CASP4P49662 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CASP4P49662 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CASP4P49662 AL391684.1-202ENST00000641293 1636 ntBASIC5.06□□□□□ -1.6
CASP4P49662 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms