Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
BRCC3P46736 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
BRCC3P46736 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.06□□□□□ -1.6
BRCC3P46736 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.06□□□□□ -1.6
BRCC3P46736 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
BRCC3P46736 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
BRCC3P46736 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.06□□□□□ -1.6
BRCC3P46736 AC025574.1-201ENST00000554784 1653 ntBASIC5.06□□□□□ -1.6
BRCC3P46736 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.06□□□□□ -1.6
BRCC3P46736 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.06□□□□□ -1.6
BRCC3P46736 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
BRCC3P46736 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BRCC3P46736 MTHFD2P5-201ENST00000320415 844 ntBASIC5.06□□□□□ -1.6
BRCC3P46736 SNORD113.2-201ENST00000364166 89 ntBASIC5.06□□□□□ -1.6
BRCC3P46736 RPS3AP23-201ENST00000401762 784 ntBASIC5.06□□□□□ -1.6
BRCC3P46736 OR51B3P-201ENST00000412287 913 ntBASIC5.06□□□□□ -1.6
BRCC3P46736 AC140479.3-201ENST00000418944 1126 ntBASIC5.06□□□□□ -1.6
BRCC3P46736 AC009480.2-201ENST00000422916 432 ntBASIC5.06□□□□□ -1.6
BRCC3P46736 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.06□□□□□ -1.6
BRCC3P46736 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.06□□□□□ -1.6
BRCC3P46736 TCEA1P3-201ENST00000443005 880 ntBASIC5.06□□□□□ -1.6
BRCC3P46736 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.06□□□□□ -1.6
BRCC3P46736 CYCSP42-201ENST00000450823 238 ntBASIC5.06□□□□□ -1.6
BRCC3P46736 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.06□□□□□ -1.6
BRCC3P46736 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.06□□□□□ -1.6
BRCC3P46736 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.06□□□□□ -1.6
BRCC3P46736 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.06□□□□□ -1.6
BRCC3P46736 HPRT1P1-201ENST00000509498 657 ntBASIC5.06□□□□□ -1.6
BRCC3P46736 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.06□□□□□ -1.6
BRCC3P46736 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.06□□□□□ -1.6
BRCC3P46736 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.06□□□□□ -1.6
BRCC3P46736 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.06□□□□□ -1.6
BRCC3P46736 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.06□□□□□ -1.6
BRCC3P46736 AC127024.5-201ENST00000580085 462 ntBASIC5.06□□□□□ -1.6
BRCC3P46736 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.06□□□□□ -1.6
BRCC3P46736 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.06□□□□□ -1.6
BRCC3P46736 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.06□□□□□ -1.6
BRCC3P46736 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.06□□□□□ -1.6
BRCC3P46736 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
BRCC3P46736 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BRCC3P46736 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.06□□□□□ -1.6
BRCC3P46736 TCP1P3-201ENST00000414406 1498 ntBASIC5.06□□□□□ -1.6
BRCC3P46736 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.06□□□□□ -1.6
BRCC3P46736 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
BRCC3P46736 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
BRCC3P46736 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BRCC3P46736 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BRCC3P46736 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
BRCC3P46736 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRCC3P46736 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRCC3P46736 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
BRCC3P46736 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.05□□□□□ -1.6
BRCC3P46736 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
BRCC3P46736 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRCC3P46736 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
BRCC3P46736 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.05□□□□□ -1.6
BRCC3P46736 AC240504.1-201ENST00000395709 845 ntBASIC5.05□□□□□ -1.6
BRCC3P46736 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.05□□□□□ -1.6
BRCC3P46736 RGS17P1-201ENST00000423358 553 ntBASIC5.05□□□□□ -1.6
BRCC3P46736 RPL23AP1-201ENST00000428990 471 ntBASIC5.05□□□□□ -1.6
BRCC3P46736 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.05□□□□□ -1.6
BRCC3P46736 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
BRCC3P46736 RPL35AP21-201ENST00000437667 333 ntBASIC5.05□□□□□ -1.6
BRCC3P46736 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.05□□□□□ -1.6
BRCC3P46736 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.05□□□□□ -1.6
BRCC3P46736 AC092905.1-201ENST00000467527 949 ntBASIC5.05□□□□□ -1.6
BRCC3P46736 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRCC3P46736 AC016687.1-201ENST00000482574 353 ntBASIC5.05□□□□□ -1.6
BRCC3P46736 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.05□□□□□ -1.6
BRCC3P46736 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.05□□□□□ -1.6
BRCC3P46736 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.05□□□□□ -1.6
BRCC3P46736 RNU6-551P-201ENST00000516661 103 ntBASIC5.05□□□□□ -1.6
BRCC3P46736 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.05□□□□□ -1.6
BRCC3P46736 FKBP1BP1-201ENST00000553366 325 ntBASIC5.05□□□□□ -1.6
BRCC3P46736 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.05□□□□□ -1.6
BRCC3P46736 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.05□□□□□ -1.6
BRCC3P46736 MIR5096-201ENST00000583713 70 ntBASIC5.05□□□□□ -1.6
BRCC3P46736 RPL26P30-202ENST00000602923 645 ntBASIC5.05□□□□□ -1.6
BRCC3P46736 AC093765.1-201ENST00000603758 881 ntBASIC5.05□□□□□ -1.6
BRCC3P46736 AL451049.1-201ENST00000608672 497 ntBASIC5.05□□□□□ -1.6
BRCC3P46736 MIR6758-201ENST00000620653 63 ntBASIC5.05□□□□□ -1.6
BRCC3P46736 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.05□□□□□ -1.6
BRCC3P46736 KARSP3-201ENST00000571212 1504 ntBASIC5.05□□□□□ -1.6
BRCC3P46736 AC011755.1-201ENST00000623763 2049 ntBASIC5.05□□□□□ -1.6
BRCC3P46736 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
BRCC3P46736 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
BRCC3P46736 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRCC3P46736 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.04□□□□□ -1.6
BRCC3P46736 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.04□□□□□ -1.6
BRCC3P46736 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
BRCC3P46736 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
BRCC3P46736 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
BRCC3P46736 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
BRCC3P46736 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
BRCC3P46736 Y_RNA.62-201ENST00000362840 99 ntBASIC5.04□□□□□ -1.6
BRCC3P46736 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.04□□□□□ -1.6
BRCC3P46736 RNA5SP397-201ENST00000391323 118 ntBASIC5.04□□□□□ -1.6
BRCC3P46736 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
BRCC3P46736 GLUD1P9-201ENST00000420997 1173 ntBASIC5.04□□□□□ -1.6
BRCC3P46736 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms