Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 CYB5AP5-201ENST00000549779 389 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AL132857.1-201ENST00000555180 708 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AL160237.3-201ENST00000604114 1013 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 OR2BH1P-201ENST00000608850 864 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AC037198.3-201ENST00000616754 526 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AC008115.4-201ENST00000619780 775 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AL356863.1-201ENST00000623378 1080 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AC074101.1-201ENST00000637861 241 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 SEPT7P7-201ENST00000420492 1301 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AC017007.4-201ENST00000503353 1352 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 CASC19-221ENST00000641309 1382 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AL022393.1-201ENST00000625142 1677 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 RN7SKP293-201ENST00000411389 296 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 MTATP6P20-201ENST00000414147 562 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 RPL23AP4-201ENST00000427757 463 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 RPL7L1P9-201ENST00000431298 745 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 MTND2P5-201ENST00000432656 1006 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 RPL35AP21-201ENST00000437667 333 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 RPS11P7-201ENST00000442125 465 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 MTND1P33-201ENST00000446251 917 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 EIF2S2P2-201ENST00000447161 982 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AC008280.2-201ENST00000455473 307 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 Z92846.1-201ENST00000456203 268 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 SNORD11.1-201ENST00000459482 85 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 SUMO2P4-201ENST00000504193 276 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 PGAM1P13-201ENST00000507497 754 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 HPRT1P1-201ENST00000509498 657 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 RNA5SP362-201ENST00000516048 118 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AC105031.1-201ENST00000518550 476 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AL109741.3-201ENST00000561748 592 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AC012254.4-201ENST00000588843 273 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AC022079.2-201ENST00000619739 566 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 UGT2B26P-201ENST00000508672 1613 ntBASIC5.19□□□□□ -1.58
TCRBV7S3A2A0A539 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 ZNF733P-202ENST00000444809 1573 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 ZNF849P-201ENST00000594711 1566 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 ZNF29P-201ENST00000225587 168 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 219.4 ms