Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LHX6Q9UPM6 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LHX6Q9UPM6 SPP1-201ENST00000237623 1581 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
LHX6Q9UPM6 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
LHX6Q9UPM6 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LHX6Q9UPM6 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC7.67□□□□□ -1.18
LHX6Q9UPM6 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
LHX6Q9UPM6 NECAP1-210ENST00000638237 2517 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
LHX6Q9UPM6 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 BRDT-203ENST00000370389 3696 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 CPA4-201ENST00000222482 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 NCAPH-201ENST00000240423 2763 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 LINC00837-201ENST00000443246 3991 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 AC244517.1-201ENST00000606030 2086 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 AC078795.1-201ENST00000602342 3143 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 AL031679.1-201ENST00000400616 525 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 ATP5HP4-201ENST00000414313 475 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 AC012065.2-201ENST00000421295 375 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 RPL12P34-201ENST00000424532 479 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 NIP7P1-201ENST00000433227 512 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 RPL12P15-201ENST00000433385 499 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 ASS1P5-201ENST00000435496 1239 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 AL451074.1-202ENST00000453762 989 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 Y_RNA.644-201ENST00000459006 113 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 RPL21P71-201ENST00000465598 459 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 Y_RNA.674-201ENST00000516362 113 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 Y_RNA.683-201ENST00000516508 93 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 RNA5SP384-201ENST00000516615 116 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 TRIM77BP-201ENST00000524985 1119 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 AP000781.1-201ENST00000534162 311 ntTSL 3 BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 THAP2-202ENST00000547843 672 ntTSL 2 BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 AL117190.2-201ENST00000554041 289 ntTSL 2 BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 AC093826.2-201ENST00000579042 108 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 AC138207.8-204ENST00000579588 527 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 RN7SL619P-201ENST00000581753 258 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 AC008385.1-201ENST00000604421 355 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 AC010900.2-201ENST00000604508 210 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 AC090525.3-201ENST00000605601 189 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 OR1X1P-201ENST00000606159 931 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 AL138960.1-201ENST00000613838 513 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 pRNA.9-201ENST00000618609 89 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 RN7SL301P-202ENST00000618767 298 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 MARK2P10-201ENST00000454959 1437 ntBASIC7.66□□□□□ -1.18
LHX6Q9UPM6 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 PPP6R3-218ENST00000529710 3228 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 THBS3-210ENST00000541576 3200 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 HEPACAM2-203ENST00000440868 2060 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC7.66□□□□□ -1.18
LHX6Q9UPM6 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
LHX6Q9UPM6 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LHX6Q9UPM6 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LHX6Q9UPM6 OSBPL3-203ENST00000396431 2969 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LHX6Q9UPM6 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
LHX6Q9UPM6 USP32P1-201ENST00000341745 3233 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LHX6Q9UPM6 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC7.65□□□□□ -1.18
LHX6Q9UPM6 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LHX6Q9UPM6 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
LHX6Q9UPM6 IST1-208ENST00000535424 4082 ntTSL 5 BASIC7.65□□□□□ -1.18
LHX6Q9UPM6 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LHX6Q9UPM6 SYNPR-201ENST00000295894 2607 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LHX6Q9UPM6 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LHX6Q9UPM6 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
LHX6Q9UPM6 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
LHX6Q9UPM6 SNCA-201ENST00000336904 3041 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
LHX6Q9UPM6 MMP13-202ENST00000340273 1470 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LHX6Q9UPM6 RN7SKP162-201ENST00000363605 345 ntBASIC7.65□□□□□ -1.18
LHX6Q9UPM6 MTF2-201ENST00000370298 4125 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LHX6Q9UPM6 SNORA41-201ENST00000384675 132 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms