Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMG20AQ9NP66 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMG20AQ9NP66 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMG20AQ9NP66 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.3□□□□□ -1.72
HMG20AQ9NP66 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.3□□□□□ -1.72
HMG20AQ9NP66 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMG20AQ9NP66 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 AC011266.1-201ENST00000624119 3569 ntBASIC4.29□□□□□ -1.72
HMG20AQ9NP66 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 SNORA17.1-201ENST00000362945 126 ntBASIC4.29□□□□□ -1.72
HMG20AQ9NP66 U3.2-201ENST00000362981 210 ntBASIC4.29□□□□□ -1.72
HMG20AQ9NP66 MIR513A2-201ENST00000385249 127 ntBASIC4.29□□□□□ -1.72
HMG20AQ9NP66 RPL23AP48-201ENST00000406913 488 ntBASIC4.29□□□□□ -1.72
HMG20AQ9NP66 RPL35AP24-201ENST00000413846 330 ntBASIC4.29□□□□□ -1.72
HMG20AQ9NP66 NPM1P4-201ENST00000414095 812 ntBASIC4.29□□□□□ -1.72
HMG20AQ9NP66 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 LINC00993-201ENST00000420453 540 ntBASIC4.29□□□□□ -1.72
HMG20AQ9NP66 AC013268.2-201ENST00000420753 337 ntBASIC4.29□□□□□ -1.72
HMG20AQ9NP66 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 GEMIN8P3-201ENST00000445417 720 ntBASIC4.29□□□□□ -1.72
HMG20AQ9NP66 RNU7-157P-201ENST00000459600 66 ntBASIC4.29□□□□□ -1.72
HMG20AQ9NP66 AC009127.1-201ENST00000467090 155 ntBASIC4.29□□□□□ -1.72
HMG20AQ9NP66 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 RN7SL174P-201ENST00000475578 289 ntBASIC4.29□□□□□ -1.72
HMG20AQ9NP66 RPS21P4-201ENST00000487122 248 ntBASIC4.29□□□□□ -1.72
HMG20AQ9NP66 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 AC011411.1-201ENST00000509592 876 ntBASIC4.29□□□□□ -1.72
HMG20AQ9NP66 AC015795.1-201ENST00000513669 327 ntBASIC4.29□□□□□ -1.72
HMG20AQ9NP66 IFITM8P-201ENST00000522529 394 ntBASIC4.29□□□□□ -1.72
HMG20AQ9NP66 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 AC008536.1-201ENST00000602872 669 ntBASIC4.29□□□□□ -1.72
HMG20AQ9NP66 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 AL353726.1-201ENST00000614041 1000 ntBASIC4.29□□□□□ -1.72
HMG20AQ9NP66 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HMG20AQ9NP66 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 MTHFD2P5-201ENST00000320415 844 ntBASIC4.28□□□□□ -1.72
HMG20AQ9NP66 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 RN7SKP162-201ENST00000363605 345 ntBASIC4.28□□□□□ -1.72
HMG20AQ9NP66 RNU1-43P-201ENST00000365052 165 ntBASIC4.28□□□□□ -1.72
HMG20AQ9NP66 AL353625.1-202ENST00000366273 571 ntBASIC4.28□□□□□ -1.72
HMG20AQ9NP66 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 U3.25-201ENST00000391209 220 ntBASIC4.28□□□□□ -1.72
HMG20AQ9NP66 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 RN7SKP114-201ENST00000410327 279 ntBASIC4.28□□□□□ -1.72
HMG20AQ9NP66 RNA5SP39-201ENST00000411245 120 ntBASIC4.28□□□□□ -1.72
HMG20AQ9NP66 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 RAC1P3-201ENST00000416129 580 ntBASIC4.28□□□□□ -1.72
HMG20AQ9NP66 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.28□□□□□ -1.72
HMG20AQ9NP66 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 RPS29P9-201ENST00000440360 171 ntBASIC4.28□□□□□ -1.72
HMG20AQ9NP66 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 SCARNA10-201ENST00000459255 330 ntBASIC4.28□□□□□ -1.72
HMG20AQ9NP66 RPS4XP1-201ENST00000482189 787 ntBASIC4.28□□□□□ -1.72
HMG20AQ9NP66 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 AC024558.1-201ENST00000505008 528 ntBASIC4.28□□□□□ -1.72
HMG20AQ9NP66 IGHV3-63-201ENST00000518422 341 ntBASIC4.28□□□□□ -1.72
HMG20AQ9NP66 IGKV2-18-201ENST00000522607 343 ntBASIC4.28□□□□□ -1.72
HMG20AQ9NP66 IGKV3D-34-201ENST00000522638 302 ntBASIC4.28□□□□□ -1.72
HMG20AQ9NP66 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 OR4A46P-201ENST00000527255 933 ntBASIC4.28□□□□□ -1.72
HMG20AQ9NP66 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 AC234775.3-201ENST00000564612 656 ntBASIC4.28□□□□□ -1.72
HMG20AQ9NP66 AC209154.1-201ENST00000582156 337 ntBASIC4.28□□□□□ -1.72
HMG20AQ9NP66 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 AL049794.2-201ENST00000616301 365 ntBASIC4.28□□□□□ -1.72
HMG20AQ9NP66 AC009704.2-201ENST00000618739 483 ntBASIC4.28□□□□□ -1.72
HMG20AQ9NP66 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 IQCB2P-201ENST00000401788 1633 ntBASIC4.28□□□□□ -1.72
HMG20AQ9NP66 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.28□□□□□ -1.72
HMG20AQ9NP66 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
HMG20AQ9NP66 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.73
HMG20AQ9NP66 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HMG20AQ9NP66 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.27□□□□□ -1.73
HMG20AQ9NP66 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms