Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MFSD8-219ENST00000641228 2559 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 GPRASP2-201ENST00000332262 3720 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 PRPF38B-201ENST00000370021 3728 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 TACR1-201ENST00000305249 4959 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 HIF1A-202ENST00000337138 3919 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 TBRG1-203ENST00000441174 4004 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 LPA-203ENST00000614786 1713 ntTSL 5 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 MAP1A-201ENST00000300231 10258 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 COPB1-201ENST00000249923 3481 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 AC026369.1-202ENST00000508953 4913 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 MMS19-202ENST00000355839 3555 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 DPF3-203ENST00000541685 4077 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 NF1P2-201ENST00000556855 2505 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 SEPT2-206ENST00000402092 3333 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 LPAR3-202ENST00000440886 3345 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 TDRD9-201ENST00000339063 3447 ntTSL 5 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 RPL24P4-201ENST00000326586 421 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 AC126755.2-208ENST00000327792 462 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 AC138969.1-213ENST00000331436 462 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 RNU6-832P-201ENST00000363319 107 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 RN7SKP80-201ENST00000365188 283 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 MIR544A-201ENST00000384855 91 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 IGHV4-28-201ENST00000390612 425 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 BX510359.2-201ENST00000417920 305 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 Z98742.3-201ENST00000418637 326 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 CYP4F32P-201ENST00000426492 504 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 DLEC1P1-201ENST00000427139 576 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 AP001187.1-201ENST00000428947 411 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 RPL23AP1-201ENST00000428990 471 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 TMEM256P2-201ENST00000440241 341 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 PIK3CDP1-201ENST00000454229 922 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 RN7SL465P-201ENST00000468411 301 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 RN7SL623P-201ENST00000494330 310 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 AC093259.1-201ENST00000509755 300 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 AP000439.1-201ENST00000544004 581 ntTSL 4 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 RPEP6-201ENST00000546228 626 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 RPL10P13-201ENST00000550757 303 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 MIR202HG-202ENST00000553459 674 ntTSL 2 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 HMGN2P47-201ENST00000559378 272 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 AC073476.2-201ENST00000569668 497 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 MIR4662B-201ENST00000579498 81 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 RN7SL300P-201ENST00000582522 318 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 RN7SL460P-201ENST00000582806 258 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 MIR548Z-201ENST00000584743 97 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 AC006547.1-206ENST00000600617 878 ntTSL 5 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 TMEM91-214ENST00000604123 757 ntTSL 3 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 SUSD2P2-201ENST00000611186 758 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 uc_338.35-201ENST00000616802 163 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 CLPS-203ENST00000622413 461 ntTSL 5 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 ERBB2-204ENST00000541774 4341 ntTSL 5 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 MAML2-201ENST00000524717 7106 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 ACTBL2-201ENST00000423391 2794 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 ZNF559-206ENST00000587557 2991 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 PLEKHA1-202ENST00000368989 3771 ntTSL 5 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 AL356599.1-205ENST00000606388 3961 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 CEP89-201ENST00000305768 5678 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 ATP2B2-204ENST00000397077 8964 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 RBM20-201ENST00000369519 7233 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 ZNF558-207ENST00000601372 7032 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 GOLGA8CP-201ENST00000446144 5237 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 ESCO2-201ENST00000305188 3922 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 RAB37-201ENST00000340415 3804 ntTSL 2 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 RAP1GAP-212ENST00000542643 3426 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 PTPRA-203ENST00000356147 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 MAPK10-261ENST00000641050 3109 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 PARP8-219ENST00000514067 2829 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 VPS11-207ENST00000620429 2739 ntTSL 5 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 LINC01182-202ENST00000510907 2228 ntTSL 2 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 AC018880.1-201ENST00000418898 1319 ntBASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 HLTF-202ENST00000392912 3896 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP3-3Q9BYR6 TEC-201ENST00000381501 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 TRPV3-211ENST00000616411 5742 ntTSL 5 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 AP3S2-201ENST00000336418 5891 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 F11-203ENST00000403665 2396 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 ERVMER61-1-201ENST00000429725 2393 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 QARS-209ENST00000464962 2362 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms