Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.61□□□□□ -1.51
SHROOM1Q2M3G4 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHROOM1Q2M3G4 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.61□□□□□ -1.51
SHROOM1Q2M3G4 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHROOM1Q2M3G4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 CCT8P1-201ENST00000413611 1657 ntBASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 VPS35P1-201ENST00000563400 1518 ntBASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 OR4K15-201ENST00000305051 1216 ntBASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 MIR659-201ENST00000384963 97 ntBASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 RPS3AP23-201ENST00000401762 784 ntBASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 COX5BP7-201ENST00000414780 274 ntBASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 RPS27AP6-201ENST00000427962 448 ntBASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 RN7SL385P-201ENST00000468873 276 ntBASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 OR10D4P-201ENST00000525892 951 ntBASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 MTND2P17-201ENST00000550281 688 ntBASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 AL121839.1-201ENST00000556233 1185 ntBASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 AP001542.1-201ENST00000591314 200 ntBASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 AL359757.1-201ENST00000623176 255 ntBASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 AC243960.7-201ENST00000623532 707 ntBASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 AL022311.1-201ENST00000623726 19416 ntBASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SHROOM1Q2M3G4 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 RNU6-1263P-201ENST00000384601 106 ntBASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 RPL21P108-201ENST00000413857 481 ntBASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 AC073143.1-201ENST00000436316 395 ntBASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 RNU6-709P-201ENST00000517257 104 ntBASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 AC005868.1-201ENST00000536421 331 ntBASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 VN1R81P-201ENST00000602085 372 ntBASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHROOM1Q2M3G4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
SHROOM1Q2M3G4 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
SHROOM1Q2M3G4 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SHROOM1Q2M3G4 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.59□□□□□ -1.52
SHROOM1Q2M3G4 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.59□□□□□ -1.52
SHROOM1Q2M3G4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 MIR129-1-201ENST00000384972 72 ntBASIC5.58□□□□□ -1.52
SHROOM1Q2M3G4 AC233289.1-201ENST00000403700 508 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms