Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NKX6-1P78426 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
NKX6-1P78426 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NKX6-1P78426 PWAR1-201ENST00000624188 2414 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NKX6-1P78426 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
NKX6-1P78426 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
NKX6-1P78426 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.36□□□□□ -1.55
NKX6-1P78426 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.36□□□□□ -1.55
NKX6-1P78426 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NKX6-1P78426 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.36□□□□□ -1.55
NKX6-1P78426 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NKX6-1P78426 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NKX6-1P78426 RNA5SP110-201ENST00000362638 115 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 RNA5SP477-201ENST00000362639 119 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 RNU1-59P-201ENST00000364829 162 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 AC116036.1-201ENST00000412199 367 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 GSTM3P2-201ENST00000412746 530 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.36□□□□□ -1.55
NKX6-1P78426 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.36□□□□□ -1.55
NKX6-1P78426 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.36□□□□□ -1.55
NKX6-1P78426 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.36□□□□□ -1.55
NKX6-1P78426 RPS17P17-201ENST00000419392 409 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.36□□□□□ -1.55
NKX6-1P78426 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.36□□□□□ -1.55
NKX6-1P78426 AC130360.1-201ENST00000425489 1117 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.36□□□□□ -1.55
NKX6-1P78426 AL365220.1-201ENST00000432923 399 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 AC090018.1-201ENST00000434369 367 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 AC093155.1-201ENST00000440164 826 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.36□□□□□ -1.55
NKX6-1P78426 RPL7P18-201ENST00000478965 734 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 COX6B1P2-201ENST00000489624 230 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 AC008638.1-201ENST00000506035 866 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.36□□□□□ -1.55
NKX6-1P78426 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.36□□□□□ -1.55
NKX6-1P78426 MTND1P22-201ENST00000510572 951 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 AC090958.1-201ENST00000511122 351 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.36□□□□□ -1.55
NKX6-1P78426 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.36□□□□□ -1.55
NKX6-1P78426 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.36□□□□□ -1.55
NKX6-1P78426 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.36□□□□□ -1.55
NKX6-1P78426 AC087373.1-201ENST00000524920 491 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 AC130365.2-201ENST00000525882 1201 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 RPA2P3-201ENST00000533268 770 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 AC027544.3-201ENST00000535082 757 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 AC005832.3-201ENST00000537929 631 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.36□□□□□ -1.55
NKX6-1P78426 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.36□□□□□ -1.55
NKX6-1P78426 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.36□□□□□ -1.55
NKX6-1P78426 RPA2P1-201ENST00000556557 721 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 AC090888.1-201ENST00000561335 1141 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 AC018552.1-201ENST00000562099 811 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 AC007225.2-201ENST00000562529 256 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.36□□□□□ -1.55
NKX6-1P78426 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.36□□□□□ -1.55
NKX6-1P78426 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.36□□□□□ -1.55
NKX6-1P78426 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.36□□□□□ -1.55
NKX6-1P78426 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.36□□□□□ -1.55
NKX6-1P78426 AC092121.1-201ENST00000569452 202 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.36□□□□□ -1.55
NKX6-1P78426 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.36□□□□□ -1.55
NKX6-1P78426 AC022069.1-201ENST00000582910 658 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.36□□□□□ -1.55
NKX6-1P78426 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.36□□□□□ -1.55
NKX6-1P78426 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.36□□□□□ -1.55
NKX6-1P78426 AL031601.1-201ENST00000605702 394 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 U1.25-201ENST00000614085 162 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 AC009090.3-201ENST00000616553 565 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 RFPL4AP6-201ENST00000616792 846 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
NKX6-1P78426 AC119674.1-213ENST00000641177 1386 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NKX6-1P78426 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.36□□□□□ -1.55
NKX6-1P78426 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
NKX6-1P78426 AC022031.1-201ENST00000585985 2593 ntBASIC5.36□□□□□ -1.55
NKX6-1P78426 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
NKX6-1P78426 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.36□□□□□ -1.55
NKX6-1P78426 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
NKX6-1P78426 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
NKX6-1P78426 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NKX6-1P78426 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NKX6-1P78426 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.35□□□□□ -1.55
NKX6-1P78426 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC093775.1-201ENST00000624154 1868 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NKX6-1P78426 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
NKX6-1P78426 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
NKX6-1P78426 DCAF13P3-201ENST00000561147 1334 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 FAM3C2-201ENST00000312214 681 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 OR52B3P-201ENST00000314715 928 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.35□□□□□ -1.55
NKX6-1P78426 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NKX6-1P78426 RNU6-757P-201ENST00000410334 100 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 RNU6-272P-201ENST00000411028 104 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 RNU2-6P-201ENST00000411404 190 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.35□□□□□ -1.55
NKX6-1P78426 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms