Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RN7SKP15-201ENST00000364742 309 ntBASIC4.95□□□□□ -1.62
CDH13P55290 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CDH13P55290 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH13P55290 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH13P55290 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CDH13P55290 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CDH13P55290 RNU6-244P-201ENST00000391028 104 ntBASIC4.95□□□□□ -1.62
CDH13P55290 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.95□□□□□ -1.62
CDH13P55290 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.95□□□□□ -1.62
CDH13P55290 UBE2D3P3-201ENST00000426992 425 ntBASIC4.95□□□□□ -1.62
CDH13P55290 BX323845.1-201ENST00000432417 179 ntBASIC4.95□□□□□ -1.62
CDH13P55290 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH13P55290 MTCYBP21-201ENST00000443300 1113 ntBASIC4.95□□□□□ -1.62
CDH13P55290 RPL34P26-201ENST00000445636 354 ntBASIC4.95□□□□□ -1.62
CDH13P55290 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH13P55290 AC004980.3-201ENST00000447046 365 ntBASIC4.95□□□□□ -1.62
CDH13P55290 BTF3P6-201ENST00000448054 499 ntBASIC4.95□□□□□ -1.62
CDH13P55290 CLIC4P1-201ENST00000453177 535 ntBASIC4.95□□□□□ -1.62
CDH13P55290 AL356981.1-201ENST00000454879 684 ntBASIC4.95□□□□□ -1.62
CDH13P55290 AC093166.2-201ENST00000455969 1017 ntBASIC4.95□□□□□ -1.62
CDH13P55290 PGAM1P13-201ENST00000507497 754 ntBASIC4.95□□□□□ -1.62
CDH13P55290 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH13P55290 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH13P55290 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH13P55290 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH13P55290 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH13P55290 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CDH13P55290 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH13P55290 AC008083.2-201ENST00000546707 476 ntBASIC4.95□□□□□ -1.62
CDH13P55290 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.95□□□□□ -1.62
CDH13P55290 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH13P55290 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.95□□□□□ -1.62
CDH13P55290 AL109741.3-201ENST00000561748 592 ntBASIC4.95□□□□□ -1.62
CDH13P55290 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH13P55290 MIR4310-201ENST00000582950 57 ntBASIC4.95□□□□□ -1.62
CDH13P55290 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH13P55290 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.95□□□□□ -1.62
CDH13P55290 AC005034.4-201ENST00000603612 899 ntBASIC4.95□□□□□ -1.62
CDH13P55290 AC120053.1-201ENST00000607706 736 ntBASIC4.95□□□□□ -1.62
CDH13P55290 AL139407.1-201ENST00000613826 1175 ntBASIC4.95□□□□□ -1.62
CDH13P55290 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH13P55290 AP004607.9-201ENST00000618202 316 ntBASIC4.95□□□□□ -1.62
CDH13P55290 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH13P55290 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.95□□□□□ -1.62
CDH13P55290 AL138960.2-201ENST00000625145 535 ntBASIC4.95□□□□□ -1.62
CDH13P55290 SAMMSON-213ENST00000641336 1521 ntBASIC4.95□□□□□ -1.62
CDH13P55290 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH13P55290 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH13P55290 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDH13P55290 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH13P55290 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH13P55290 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
CDH13P55290 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CDH13P55290 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CDH13P55290 MTND5P11-201ENST00000511037 1812 ntBASIC4.95□□□□□ -1.62
CDH13P55290 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH13P55290 SOCS5P3-201ENST00000425115 1576 ntBASIC4.95□□□□□ -1.62
CDH13P55290 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH13P55290 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CDH13P55290 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CDH13P55290 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH13P55290 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
CDH13P55290 PCAT14-202ENST00000627127 3935 ntBASIC4.94□□□□□ -1.62
CDH13P55290 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH13P55290 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CDH13P55290 AC011493.1-201ENST00000596753 1632 ntBASIC4.94□□□□□ -1.62
CDH13P55290 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.94□□□□□ -1.62
CDH13P55290 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH13P55290 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.94□□□□□ -1.62
CDH13P55290 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH13P55290 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
CDH13P55290 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH13P55290 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH13P55290 TTC39DP-201ENST00000416781 1688 ntBASIC4.94□□□□□ -1.62
CDH13P55290 AL022393.1-201ENST00000625142 1677 ntBASIC4.94□□□□□ -1.62
CDH13P55290 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CDH13P55290 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH13P55290 RNU6-185P-201ENST00000384421 107 ntBASIC4.94□□□□□ -1.62
CDH13P55290 SNORA17A-201ENST00000391185 133 ntBASIC4.94□□□□□ -1.62
CDH13P55290 AC005522.1-201ENST00000395416 346 ntBASIC4.94□□□□□ -1.62
CDH13P55290 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH13P55290 AL359643.1-201ENST00000404109 423 ntBASIC4.94□□□□□ -1.62
CDH13P55290 NUDT19P3-201ENST00000404698 555 ntBASIC4.94□□□□□ -1.62
CDH13P55290 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.94□□□□□ -1.62
CDH13P55290 RN7SKP59-201ENST00000410520 314 ntBASIC4.94□□□□□ -1.62
CDH13P55290 RNA5SP296-201ENST00000410523 111 ntBASIC4.94□□□□□ -1.62
CDH13P55290 AC002524.1-201ENST00000411687 547 ntBASIC4.94□□□□□ -1.62
CDH13P55290 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH13P55290 AL606495.1-201ENST00000422100 813 ntBASIC4.94□□□□□ -1.62
CDH13P55290 AL035458.1-201ENST00000433096 585 ntBASIC4.94□□□□□ -1.62
CDH13P55290 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH13P55290 TXNP5-201ENST00000441043 315 ntBASIC4.94□□□□□ -1.62
CDH13P55290 RPS27P5-201ENST00000444247 244 ntBASIC4.94□□□□□ -1.62
CDH13P55290 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.94□□□□□ -1.62
CDH13P55290 RPS4XP1-201ENST00000482189 787 ntBASIC4.94□□□□□ -1.62
CDH13P55290 MTCO2P9-201ENST00000503214 694 ntBASIC4.94□□□□□ -1.62
CDH13P55290 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH13P55290 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.94□□□□□ -1.62
CDH13P55290 RNA5SP362-201ENST00000516048 118 ntBASIC4.94□□□□□ -1.62
CDH13P55290 AC013701.1-201ENST00000522657 465 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms