Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.86□□□□□ -1.63
FDFT1P37268 BTG3P1-201ENST00000435859 716 ntBASIC4.86□□□□□ -1.63
FDFT1P37268 PRPF38AP2-201ENST00000438179 851 ntBASIC4.86□□□□□ -1.63
FDFT1P37268 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.86□□□□□ -1.63
FDFT1P37268 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.86□□□□□ -1.63
FDFT1P37268 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.86□□□□□ -1.63
FDFT1P37268 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.86□□□□□ -1.63
FDFT1P37268 AC093890.1-201ENST00000502554 540 ntBASIC4.86□□□□□ -1.63
FDFT1P37268 GAPDHP56-201ENST00000506031 988 ntBASIC4.86□□□□□ -1.63
FDFT1P37268 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.86□□□□□ -1.63
FDFT1P37268 RNU1-6P-201ENST00000516290 144 ntBASIC4.86□□□□□ -1.63
FDFT1P37268 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.86□□□□□ -1.63
FDFT1P37268 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.86□□□□□ -1.63
FDFT1P37268 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.86□□□□□ -1.63
FDFT1P37268 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
FDFT1P37268 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.86□□□□□ -1.63
FDFT1P37268 AC022726.1-201ENST00000587475 207 ntBASIC4.86□□□□□ -1.63
FDFT1P37268 AC011453.2-201ENST00000603737 729 ntBASIC4.86□□□□□ -1.63
FDFT1P37268 COX6CP4-201ENST00000605798 228 ntBASIC4.86□□□□□ -1.63
FDFT1P37268 AL135786.2-201ENST00000608422 615 ntBASIC4.86□□□□□ -1.63
FDFT1P37268 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.86□□□□□ -1.63
FDFT1P37268 AC234782.5-201ENST00000617723 324 ntBASIC4.86□□□□□ -1.63
FDFT1P37268 AC112694.2-201ENST00000623697 768 ntBASIC4.86□□□□□ -1.63
FDFT1P37268 SCN1A-220ENST00000641603 12506 ntBASIC4.86□□□□□ -1.63
FDFT1P37268 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
FDFT1P37268 AL672167.1-205ENST00000641112 3080 ntBASIC4.86□□□□□ -1.63
FDFT1P37268 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.86□□□□□ -1.63
FDFT1P37268 MTCO1P22-201ENST00000604619 1360 ntBASIC4.86□□□□□ -1.63
FDFT1P37268 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
FDFT1P37268 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
FDFT1P37268 LINC01355-201ENST00000566551 5444 ntBASIC4.86□□□□□ -1.63
FDFT1P37268 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
FDFT1P37268 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
FDFT1P37268 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
FDFT1P37268 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.85□□□□□ -1.63
FDFT1P37268 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
FDFT1P37268 RNU6-697P-201ENST00000363348 107 ntBASIC4.85□□□□□ -1.63
FDFT1P37268 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
FDFT1P37268 U3.30-201ENST00000391308 210 ntBASIC4.85□□□□□ -1.63
FDFT1P37268 AL590762.2-201ENST00000395798 571 ntBASIC4.85□□□□□ -1.63
FDFT1P37268 RPL5P19-201ENST00000404228 893 ntBASIC4.85□□□□□ -1.63
FDFT1P37268 RN7SKP213-201ENST00000410746 298 ntBASIC4.85□□□□□ -1.63
FDFT1P37268 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.85□□□□□ -1.63
FDFT1P37268 AL645608.4-201ENST00000423619 154 ntBASIC4.85□□□□□ -1.63
FDFT1P37268 AL121578.1-201ENST00000428051 892 ntBASIC4.85□□□□□ -1.63
FDFT1P37268 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.85□□□□□ -1.63
FDFT1P37268 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.85□□□□□ -1.63
FDFT1P37268 MTCO3P17-201ENST00000443775 513 ntBASIC4.85□□□□□ -1.63
FDFT1P37268 AC112498.1-201ENST00000444401 332 ntBASIC4.85□□□□□ -1.63
FDFT1P37268 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
FDFT1P37268 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.85□□□□□ -1.63
FDFT1P37268 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.85□□□□□ -1.63
FDFT1P37268 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.85□□□□□ -1.63
FDFT1P37268 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.85□□□□□ -1.63
FDFT1P37268 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.85□□□□□ -1.63
FDFT1P37268 AC133555.2-201ENST00000550213 292 ntBASIC4.85□□□□□ -1.63
FDFT1P37268 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.85□□□□□ -1.63
FDFT1P37268 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.85□□□□□ -1.63
FDFT1P37268 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.85□□□□□ -1.63
FDFT1P37268 ADAM3B-201ENST00000569937 840 ntBASIC4.85□□□□□ -1.63
FDFT1P37268 MTND2P13-201ENST00000577438 1039 ntBASIC4.85□□□□□ -1.63
FDFT1P37268 AF117829.2-201ENST00000619538 361 ntBASIC4.85□□□□□ -1.63
FDFT1P37268 AC091905.4-201ENST00000623432 202 ntBASIC4.85□□□□□ -1.63
FDFT1P37268 AL136164.3-201ENST00000624429 3978 ntBASIC4.85□□□□□ -1.63
FDFT1P37268 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
FDFT1P37268 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
FDFT1P37268 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
FDFT1P37268 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.85□□□□□ -1.63
FDFT1P37268 AC007382.1-201ENST00000624376 2618 ntBASIC4.84□□□□□ -1.63
FDFT1P37268 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
FDFT1P37268 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
FDFT1P37268 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
FDFT1P37268 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.84□□□□□ -1.63
FDFT1P37268 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
FDFT1P37268 NCLP2-201ENST00000416078 1462 ntBASIC4.84□□□□□ -1.63
FDFT1P37268 BTBD10P1-201ENST00000549824 1352 ntBASIC4.84□□□□□ -1.63
FDFT1P37268 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
FDFT1P37268 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
FDFT1P37268 IL6STP1-201ENST00000346911 1020 ntBASIC4.84□□□□□ -1.63
FDFT1P37268 MT-RNR1-201ENST00000389680 954 ntBASIC4.84□□□□□ -1.63
FDFT1P37268 GLUD1P9-201ENST00000420997 1173 ntBASIC4.84□□□□□ -1.63
FDFT1P37268 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.84□□□□□ -1.63
FDFT1P37268 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
FDFT1P37268 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.84□□□□□ -1.63
FDFT1P37268 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.84□□□□□ -1.63
FDFT1P37268 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.84□□□□□ -1.63
FDFT1P37268 AURKAPS2-201ENST00000454983 333 ntBASIC4.84□□□□□ -1.63
FDFT1P37268 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.84□□□□□ -1.63
FDFT1P37268 RPSAP50-201ENST00000481955 852 ntBASIC4.84□□□□□ -1.63
FDFT1P37268 DEFB109F-201ENST00000491870 277 ntBASIC4.84□□□□□ -1.63
FDFT1P37268 AC104971.1-201ENST00000495117 578 ntBASIC4.84□□□□□ -1.63
FDFT1P37268 AC008953.1-201ENST00000497334 318 ntBASIC4.84□□□□□ -1.63
FDFT1P37268 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
FDFT1P37268 AC021146.3-201ENST00000511911 260 ntBASIC4.84□□□□□ -1.63
FDFT1P37268 AC115989.2-201ENST00000578640 563 ntBASIC4.84□□□□□ -1.63
FDFT1P37268 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.84□□□□□ -1.63
FDFT1P37268 AC005520.3-201ENST00000602874 370 ntBASIC4.84□□□□□ -1.63
FDFT1P37268 AC130352.1-201ENST00000602979 661 ntBASIC4.84□□□□□ -1.63
FDFT1P37268 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
FDFT1P37268 uc_338.18-201ENST00000615451 175 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms