Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.4□□□□□ -1.55
COL4A5P29400 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.4□□□□□ -1.55
COL4A5P29400 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.4□□□□□ -1.55
COL4A5P29400 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.4□□□□□ -1.55
COL4A5P29400 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.4□□□□□ -1.55
COL4A5P29400 MIR6875-201ENST00000617506 72 ntBASIC5.4□□□□□ -1.55
COL4A5P29400 AC015804.1-201ENST00000622935 435 ntBASIC5.4□□□□□ -1.55
COL4A5P29400 AC099654.3-201ENST00000447087 1546 ntBASIC5.4□□□□□ -1.55
COL4A5P29400 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.4□□□□□ -1.55
COL4A5P29400 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL4A5P29400 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.39□□□□□ -1.55
COL4A5P29400 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL4A5P29400 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.39□□□□□ -1.55
COL4A5P29400 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL4A5P29400 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL4A5P29400 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL4A5P29400 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL4A5P29400 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL4A5P29400 RNA5SP124-201ENST00000362739 110 ntBASIC5.39□□□□□ -1.55
COL4A5P29400 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.39□□□□□ -1.55
COL4A5P29400 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.39□□□□□ -1.55
COL4A5P29400 AL445584.1-201ENST00000431451 330 ntBASIC5.39□□□□□ -1.55
COL4A5P29400 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.39□□□□□ -1.55
COL4A5P29400 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.39□□□□□ -1.55
COL4A5P29400 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL4A5P29400 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.39□□□□□ -1.55
COL4A5P29400 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.39□□□□□ -1.55
COL4A5P29400 AP001804.2-201ENST00000533932 910 ntBASIC5.39□□□□□ -1.55
COL4A5P29400 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.39□□□□□ -1.55
COL4A5P29400 CYCSP40-201ENST00000575927 294 ntBASIC5.39□□□□□ -1.55
COL4A5P29400 AL161729.3-201ENST00000603533 673 ntBASIC5.39□□□□□ -1.55
COL4A5P29400 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.39□□□□□ -1.55
COL4A5P29400 OR8G7P-201ENST00000616658 848 ntBASIC5.39□□□□□ -1.55
COL4A5P29400 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.39□□□□□ -1.55
COL4A5P29400 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COL4A5P29400 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL4A5P29400 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.39□□□□□ -1.55
COL4A5P29400 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.39□□□□□ -1.55
COL4A5P29400 AC079777.1-201ENST00000623836 1953 ntBASIC5.39□□□□□ -1.55
COL4A5P29400 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL4A5P29400 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.38□□□□□ -1.55
COL4A5P29400 RN7SKP202-201ENST00000410439 330 ntBASIC5.38□□□□□ -1.55
COL4A5P29400 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.38□□□□□ -1.55
COL4A5P29400 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.38□□□□□ -1.55
COL4A5P29400 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.38□□□□□ -1.55
COL4A5P29400 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL4A5P29400 RPL7P33-201ENST00000444159 742 ntBASIC5.38□□□□□ -1.55
COL4A5P29400 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.38□□□□□ -1.55
COL4A5P29400 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.38□□□□□ -1.55
COL4A5P29400 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.38□□□□□ -1.55
COL4A5P29400 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.38□□□□□ -1.55
COL4A5P29400 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
COL4A5P29400 AP003400.2-201ENST00000624036 666 ntBASIC5.38□□□□□ -1.55
COL4A5P29400 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.38□□□□□ -1.55
COL4A5P29400 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.38□□□□□ -1.55
COL4A5P29400 TCP11X1-202ENST00000622971 1372 ntBASIC5.38□□□□□ -1.55
COL4A5P29400 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
COL4A5P29400 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL4A5P29400 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL4A5P29400 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.38□□□□□ -1.55
COL4A5P29400 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A5P29400 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.37□□□□□ -1.55
COL4A5P29400 FTH1P21-201ENST00000512179 511 ntBASIC5.37□□□□□ -1.55
COL4A5P29400 RNA5SP49-201ENST00000516450 115 ntBASIC5.37□□□□□ -1.55
COL4A5P29400 AC105031.1-201ENST00000518550 476 ntBASIC5.37□□□□□ -1.55
COL4A5P29400 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.37□□□□□ -1.55
COL4A5P29400 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.37□□□□□ -1.55
COL4A5P29400 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.37□□□□□ -1.55
COL4A5P29400 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.37□□□□□ -1.55
COL4A5P29400 AC024220.1-201ENST00000603675 484 ntBASIC5.37□□□□□ -1.55
COL4A5P29400 LINC01808-202ENST00000641680 1116 ntBASIC5.37□□□□□ -1.55
COL4A5P29400 AL445487.1-201ENST00000415694 1580 ntBASIC5.37□□□□□ -1.55
COL4A5P29400 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A5P29400 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.37□□□□□ -1.55
COL4A5P29400 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A5P29400 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A5P29400 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.37□□□□□ -1.55
COL4A5P29400 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.37□□□□□ -1.55
COL4A5P29400 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A5P29400 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
COL4A5P29400 AL672167.2-201ENST00000377164 879 ntBASIC5.37□□□□□ -1.55
COL4A5P29400 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.37□□□□□ -1.55
COL4A5P29400 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.37□□□□□ -1.55
COL4A5P29400 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.37□□□□□ -1.55
COL4A5P29400 CKS1BP6-201ENST00000424932 240 ntBASIC5.37□□□□□ -1.55
COL4A5P29400 AC114495.1-201ENST00000441274 436 ntBASIC5.37□□□□□ -1.55
COL4A5P29400 RHEBP2-201ENST00000450289 600 ntBASIC5.37□□□□□ -1.55
COL4A5P29400 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.37□□□□□ -1.55
COL4A5P29400 AC091959.2-201ENST00000477363 321 ntBASIC5.37□□□□□ -1.55
COL4A5P29400 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.37□□□□□ -1.55
COL4A5P29400 MYL12BP2-201ENST00000503948 512 ntBASIC5.37□□□□□ -1.55
COL4A5P29400 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.37□□□□□ -1.55
COL4A5P29400 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.37□□□□□ -1.55
COL4A5P29400 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.37□□□□□ -1.55
COL4A5P29400 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.37□□□□□ -1.55
COL4A5P29400 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A5P29400 MIR4286-201ENST00000580651 93 ntBASIC5.37□□□□□ -1.55
COL4A5P29400 AL352984.2-202ENST00000613699 155 ntBASIC5.37□□□□□ -1.55
COL4A5P29400 AC007546.1-201ENST00000619452 559 ntBASIC5.37□□□□□ -1.55
COL4A5P29400 TMEM30CP-203ENST00000637814 1035 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms