Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC015804.1-201ENST00000622935 435 ntBASIC4.66□□□□□ -1.66
CLDN9O95484 AC018445.2-201ENST00000622987 260 ntBASIC4.66□□□□□ -1.66
CLDN9O95484 AP002799.1-201ENST00000623552 423 ntBASIC4.66□□□□□ -1.66
CLDN9O95484 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.66□□□□□ -1.66
CLDN9O95484 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
CLDN9O95484 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.66□□□□□ -1.66
CLDN9O95484 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
CLDN9O95484 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CLDN9O95484 AL445487.1-201ENST00000415694 1580 ntBASIC4.65□□□□□ -1.66
CLDN9O95484 TLK1P1-201ENST00000456760 2440 ntBASIC4.65□□□□□ -1.66
CLDN9O95484 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.65□□□□□ -1.66
CLDN9O95484 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLDN9O95484 RNA5SP305-201ENST00000362665 119 ntBASIC4.65□□□□□ -1.67
CLDN9O95484 RNU4-4P-201ENST00000364588 130 ntBASIC4.65□□□□□ -1.67
CLDN9O95484 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLDN9O95484 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLDN9O95484 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
CLDN9O95484 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CLDN9O95484 CHMP1B2P-201ENST00000399581 597 ntBASIC4.65□□□□□ -1.67
CLDN9O95484 OR13Z1P-201ENST00000416141 834 ntBASIC4.65□□□□□ -1.67
CLDN9O95484 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.65□□□□□ -1.67
CLDN9O95484 FABP7P2-201ENST00000429946 379 ntBASIC4.65□□□□□ -1.67
CLDN9O95484 PRPF38AP2-201ENST00000438179 851 ntBASIC4.65□□□□□ -1.67
CLDN9O95484 C1DP3-201ENST00000455013 423 ntBASIC4.65□□□□□ -1.67
CLDN9O95484 RPL7AP10-201ENST00000481016 791 ntBASIC4.65□□□□□ -1.67
CLDN9O95484 RN7SL727P-201ENST00000482164 296 ntBASIC4.65□□□□□ -1.67
CLDN9O95484 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.65□□□□□ -1.67
CLDN9O95484 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.65□□□□□ -1.67
CLDN9O95484 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.65□□□□□ -1.67
CLDN9O95484 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.65□□□□□ -1.67
CLDN9O95484 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.65□□□□□ -1.67
CLDN9O95484 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.65□□□□□ -1.67
CLDN9O95484 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.65□□□□□ -1.67
CLDN9O95484 FAM60CP-201ENST00000591086 664 ntBASIC4.65□□□□□ -1.67
CLDN9O95484 AC009303.3-201ENST00000591103 736 ntBASIC4.65□□□□□ -1.67
CLDN9O95484 AC007497.1-201ENST00000610421 561 ntBASIC4.65□□□□□ -1.67
CLDN9O95484 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.65□□□□□ -1.67
CLDN9O95484 AP001642.1-201ENST00000624727 2117 ntBASIC4.65□□□□□ -1.67
CLDN9O95484 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLDN9O95484 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.67
CLDN9O95484 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLDN9O95484 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.65□□□□□ -1.67
CLDN9O95484 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLDN9O95484 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CLDN9O95484 AC139713.2-215ENST00000641428 5037 ntBASIC4.65□□□□□ -1.67
CLDN9O95484 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN9O95484 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN9O95484 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
CLDN9O95484 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CLDN9O95484 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN9O95484 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
CLDN9O95484 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CLDN9O95484 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN9O95484 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN9O95484 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN9O95484 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.64□□□□□ -1.67
CLDN9O95484 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN9O95484 SNORA74A-201ENST00000364089 198 ntBASIC4.64□□□□□ -1.67
CLDN9O95484 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN9O95484 AC136624.1-201ENST00000400791 413 ntBASIC4.64□□□□□ -1.67
CLDN9O95484 RPL5P19-201ENST00000404228 893 ntBASIC4.64□□□□□ -1.67
CLDN9O95484 AC114755.2-201ENST00000413520 361 ntBASIC4.64□□□□□ -1.67
CLDN9O95484 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CLDN9O95484 LINC00993-201ENST00000420453 540 ntBASIC4.64□□□□□ -1.67
CLDN9O95484 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.64□□□□□ -1.67
CLDN9O95484 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.64□□□□□ -1.67
CLDN9O95484 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN9O95484 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN9O95484 AC093414.1-201ENST00000434712 514 ntBASIC4.64□□□□□ -1.67
CLDN9O95484 RPS26P2-201ENST00000440331 348 ntBASIC4.64□□□□□ -1.67
CLDN9O95484 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.64□□□□□ -1.67
CLDN9O95484 AL591623.2-201ENST00000449978 222 ntBASIC4.64□□□□□ -1.67
CLDN9O95484 AC234781.3-201ENST00000452540 973 ntBASIC4.64□□□□□ -1.67
CLDN9O95484 SBDSP1-204ENST00000453858 737 ntBASIC4.64□□□□□ -1.67
CLDN9O95484 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.64□□□□□ -1.67
CLDN9O95484 NDUFA5P12-201ENST00000503796 343 ntBASIC4.64□□□□□ -1.67
CLDN9O95484 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.64□□□□□ -1.67
CLDN9O95484 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.64□□□□□ -1.67
CLDN9O95484 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.64□□□□□ -1.67
CLDN9O95484 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN9O95484 RNU6-319P-201ENST00000516025 108 ntBASIC4.64□□□□□ -1.67
CLDN9O95484 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CLDN9O95484 AL049874.4-201ENST00000557593 255 ntBASIC4.64□□□□□ -1.67
CLDN9O95484 AC093249.4-201ENST00000564755 259 ntBASIC4.64□□□□□ -1.67
CLDN9O95484 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.64□□□□□ -1.67
CLDN9O95484 AC020910.3-201ENST00000603701 874 ntBASIC4.64□□□□□ -1.67
CLDN9O95484 AC012213.4-201ENST00000606457 354 ntBASIC4.64□□□□□ -1.67
CLDN9O95484 AC097505.1-201ENST00000610199 565 ntBASIC4.64□□□□□ -1.67
CLDN9O95484 AC090510.2-201ENST00000617465 629 ntBASIC4.64□□□□□ -1.67
CLDN9O95484 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.64□□□□□ -1.67
CLDN9O95484 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN9O95484 AL121950.1-201ENST00000624993 2077 ntBASIC4.64□□□□□ -1.67
CLDN9O95484 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN9O95484 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN9O95484 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.64□□□□□ -1.67
CLDN9O95484 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CLDN9O95484 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.64□□□□□ -1.67
CLDN9O95484 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN9O95484 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN9O95484 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms