Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.8□□□□□ -1.64
SNX3O60493 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNX3O60493 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.8□□□□□ -1.64
SNX3O60493 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SNX3O60493 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
SNX3O60493 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.79□□□□□ -1.64
SNX3O60493 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.79□□□□□ -1.64
SNX3O60493 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.79□□□□□ -1.64
SNX3O60493 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX3O60493 RLIMP2-201ENST00000427891 1563 ntBASIC4.79□□□□□ -1.64
SNX3O60493 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SNX3O60493 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.79□□□□□ -1.64
SNX3O60493 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SNX3O60493 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SNX3O60493 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX3O60493 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SNX3O60493 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX3O60493 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX3O60493 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX3O60493 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX3O60493 RNU1-149P-201ENST00000390870 161 ntBASIC4.79□□□□□ -1.64
SNX3O60493 RNA5SP339-201ENST00000390987 122 ntBASIC4.79□□□□□ -1.64
SNX3O60493 HMGB3P7-201ENST00000400214 611 ntBASIC4.79□□□□□ -1.64
SNX3O60493 ARL4AP5-201ENST00000404372 599 ntBASIC4.79□□□□□ -1.64
SNX3O60493 AL121834.1-202ENST00000404494 277 ntBASIC4.79□□□□□ -1.64
SNX3O60493 AL136131.1-201ENST00000406079 803 ntBASIC4.79□□□□□ -1.64
SNX3O60493 PTGES3P2-201ENST00000407942 482 ntBASIC4.79□□□□□ -1.64
SNX3O60493 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.79□□□□□ -1.64
SNX3O60493 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.79□□□□□ -1.64
SNX3O60493 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX3O60493 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX3O60493 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX3O60493 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.79□□□□□ -1.64
SNX3O60493 AL445665.1-202ENST00000452436 324 ntBASIC4.79□□□□□ -1.64
SNX3O60493 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX3O60493 SEPT7P3-201ENST00000455017 621 ntBASIC4.79□□□□□ -1.64
SNX3O60493 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.79□□□□□ -1.64
SNX3O60493 RN7SL51P-201ENST00000468230 285 ntBASIC4.79□□□□□ -1.64
SNX3O60493 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX3O60493 RPL23AP65-201ENST00000475608 468 ntBASIC4.79□□□□□ -1.64
SNX3O60493 RPL23AP73-201ENST00000492507 471 ntBASIC4.79□□□□□ -1.64
SNX3O60493 GTF2F2P1-201ENST00000511083 675 ntBASIC4.79□□□□□ -1.64
SNX3O60493 AC027338.1-201ENST00000514840 825 ntBASIC4.79□□□□□ -1.64
SNX3O60493 CYCSP22-201ENST00000517555 339 ntBASIC4.79□□□□□ -1.64
SNX3O60493 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX3O60493 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX3O60493 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX3O60493 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX3O60493 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX3O60493 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX3O60493 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX3O60493 AC021483.2-201ENST00000567415 758 ntBASIC4.79□□□□□ -1.64
SNX3O60493 AC015720.2-201ENST00000567709 334 ntBASIC4.79□□□□□ -1.64
SNX3O60493 MTND6P33-201ENST00000571794 183 ntBASIC4.79□□□□□ -1.64
SNX3O60493 MIR744-201ENST00000578242 98 ntBASIC4.79□□□□□ -1.64
SNX3O60493 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX3O60493 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.79□□□□□ -1.64
SNX3O60493 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX3O60493 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX3O60493 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SNX3O60493 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX3O60493 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.79□□□□□ -1.64
SNX3O60493 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX3O60493 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SNX3O60493 AP000542.2-201ENST00000623199 6179 ntBASIC4.79□□□□□ -1.64
SNX3O60493 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SNX3O60493 AC007342.7-201ENST00000624610 2337 ntBASIC4.79□□□□□ -1.64
SNX3O60493 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX3O60493 AL121950.1-201ENST00000624993 2077 ntBASIC4.79□□□□□ -1.64
SNX3O60493 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SNX3O60493 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.79□□□□□ -1.64
SNX3O60493 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
SNX3O60493 Z98755.1-201ENST00000407015 1384 ntBASIC4.78□□□□□ -1.64
SNX3O60493 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SNX3O60493 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.78□□□□□ -1.64
SNX3O60493 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SNX3O60493 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SNX3O60493 NXF4-202ENST00000416098 1465 ntBASIC4.78□□□□□ -1.64
SNX3O60493 OR52B3P-201ENST00000314715 928 ntBASIC4.78□□□□□ -1.64
SNX3O60493 OR56B2P-201ENST00000317102 954 ntBASIC4.78□□□□□ -1.64
SNX3O60493 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SNX3O60493 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX3O60493 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX3O60493 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.78□□□□□ -1.64
SNX3O60493 RPL34P3-201ENST00000421454 338 ntBASIC4.78□□□□□ -1.64
SNX3O60493 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX3O60493 TNPO1P1-201ENST00000423641 1138 ntBASIC4.78□□□□□ -1.64
SNX3O60493 ELOCP3-201ENST00000439303 348 ntBASIC4.78□□□□□ -1.64
SNX3O60493 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.78□□□□□ -1.64
SNX3O60493 SUMO2P1-206ENST00000445436 284 ntBASIC4.78□□□□□ -1.64
SNX3O60493 Z92846.1-201ENST00000456203 268 ntBASIC4.78□□□□□ -1.64
SNX3O60493 HSPE1P22-201ENST00000456856 327 ntBASIC4.78□□□□□ -1.64
SNX3O60493 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX3O60493 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.78□□□□□ -1.64
SNX3O60493 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX3O60493 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX3O60493 RPS4XP20-201ENST00000505751 772 ntBASIC4.78□□□□□ -1.64
SNX3O60493 AL671862.1-201ENST00000515851 349 ntBASIC4.78□□□□□ -1.64
SNX3O60493 RNU6-1308P-201ENST00000516817 103 ntBASIC4.78□□□□□ -1.64
SNX3O60493 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 233 ms