Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SOX1O00570 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
SOX1O00570 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SOX1O00570 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SOX1O00570 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
SOX1O00570 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SOX1O00570 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SOX1O00570 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SOX1O00570 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC6.78□□□□□ -1.32
SOX1O00570 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
SOX1O00570 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.78□□□□□ -1.32
SOX1O00570 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SOX1O00570 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
SOX1O00570 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SOX1O00570 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC6.77□□□□□ -1.33
SOX1O00570 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SOX1O00570 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.77□□□□□ -1.33
SOX1O00570 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.77□□□□□ -1.33
SOX1O00570 AC020658.2-201ENST00000559030 4020 ntBASIC6.77□□□□□ -1.33
SOX1O00570 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
SOX1O00570 AL139805.2-201ENST00000455305 2433 ntBASIC6.77□□□□□ -1.33
SOX1O00570 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SOX1O00570 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.77□□□□□ -1.33
SOX1O00570 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SOX1O00570 HMGB1P5-201ENST00000255320 642 ntBASIC6.77□□□□□ -1.33
SOX1O00570 RNA5SP507-201ENST00000363603 121 ntBASIC6.77□□□□□ -1.33
SOX1O00570 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
SOX1O00570 AL356967.1-201ENST00000406305 431 ntBASIC6.77□□□□□ -1.33
SOX1O00570 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC6.77□□□□□ -1.33
SOX1O00570 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
SOX1O00570 HSPE1P16-201ENST00000426640 348 ntBASIC6.77□□□□□ -1.33
SOX1O00570 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC6.77□□□□□ -1.33
SOX1O00570 AL365184.2-201ENST00000431139 435 ntBASIC6.77□□□□□ -1.33
SOX1O00570 HMGB1P45-201ENST00000435986 653 ntBASIC6.77□□□□□ -1.33
SOX1O00570 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC6.77□□□□□ -1.33
SOX1O00570 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.77□□□□□ -1.33
SOX1O00570 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.77□□□□□ -1.33
SOX1O00570 AL353093.1-201ENST00000441292 436 ntBASIC6.77□□□□□ -1.33
SOX1O00570 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC6.77□□□□□ -1.33
SOX1O00570 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC6.77□□□□□ -1.33
SOX1O00570 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC6.77□□□□□ -1.33
SOX1O00570 RPL30P9-201ENST00000465586 330 ntBASIC6.77□□□□□ -1.33
SOX1O00570 RN7SL30P-201ENST00000488416 306 ntBASIC6.77□□□□□ -1.33
SOX1O00570 AC091951.2-201ENST00000500762 203 ntBASIC6.77□□□□□ -1.33
SOX1O00570 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SOX1O00570 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.77□□□□□ -1.33
SOX1O00570 AC010342.1-201ENST00000514047 877 ntBASIC6.77□□□□□ -1.33
SOX1O00570 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.77□□□□□ -1.33
SOX1O00570 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC6.77□□□□□ -1.33
SOX1O00570 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC6.77□□□□□ -1.33
SOX1O00570 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.77□□□□□ -1.33
SOX1O00570 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SOX1O00570 OR8L1P-201ENST00000534005 955 ntBASIC6.77□□□□□ -1.33
SOX1O00570 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SOX1O00570 HAUS8P1-201ENST00000549005 542 ntBASIC6.77□□□□□ -1.33
SOX1O00570 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.77□□□□□ -1.33
SOX1O00570 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.77□□□□□ -1.33
SOX1O00570 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.77□□□□□ -1.33
SOX1O00570 AC005332.4-201ENST00000592752 579 ntBASIC6.77□□□□□ -1.33
SOX1O00570 VN1R79P-201ENST00000593540 513 ntBASIC6.77□□□□□ -1.33
SOX1O00570 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.77□□□□□ -1.33
SOX1O00570 BNIP3P9-201ENST00000603714 553 ntBASIC6.77□□□□□ -1.33
SOX1O00570 AC111186.1-201ENST00000604684 130 ntBASIC6.77□□□□□ -1.33
SOX1O00570 AC006840.1-201ENST00000623069 542 ntBASIC6.77□□□□□ -1.33
SOX1O00570 AC124864.2-201ENST00000624736 186 ntBASIC6.77□□□□□ -1.33
SOX1O00570 OR52B5P-202ENST00000641118 1110 ntBASIC6.77□□□□□ -1.33
SOX1O00570 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
SOX1O00570 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SOX1O00570 Z99496.1-201ENST00000469424 1477 ntBASIC6.77□□□□□ -1.33
SOX1O00570 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SOX1O00570 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SOX1O00570 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SOX1O00570 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SOX1O00570 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SOX1O00570 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
SOX1O00570 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
SOX1O00570 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SOX1O00570 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
SOX1O00570 LINC02019-201ENST00000608605 2060 ntBASIC6.77□□□□□ -1.33
SOX1O00570 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.76□□□□□ -1.33
SOX1O00570 AC092111.2-201ENST00000611627 1414 ntBASIC6.76□□□□□ -1.33
SOX1O00570 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SOX1O00570 AC011416.1-201ENST00000514947 1732 ntBASIC6.76□□□□□ -1.33
SOX1O00570 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.76□□□□□ -1.33
SOX1O00570 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.76□□□□□ -1.33
SOX1O00570 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC6.76□□□□□ -1.33
SOX1O00570 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SOX1O00570 Y_RNA.372-201ENST00000365599 102 ntBASIC6.76□□□□□ -1.33
SOX1O00570 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SOX1O00570 RNU6-1009P-201ENST00000390996 107 ntBASIC6.76□□□□□ -1.33
SOX1O00570 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6.76□□□□□ -1.33
SOX1O00570 RPS3AP23-201ENST00000401762 784 ntBASIC6.76□□□□□ -1.33
SOX1O00570 FCF1P10-201ENST00000407590 479 ntBASIC6.76□□□□□ -1.33
SOX1O00570 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC6.76□□□□□ -1.33
SOX1O00570 USP9YP20-201ENST00000419224 558 ntBASIC6.76□□□□□ -1.33
SOX1O00570 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.76□□□□□ -1.33
SOX1O00570 AC015983.1-201ENST00000441577 373 ntBASIC6.76□□□□□ -1.33
SOX1O00570 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC6.76□□□□□ -1.33
SOX1O00570 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SOX1O00570 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms