Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 ZNF652P1-201ENST00000442420 1309 ntBASIC4.64□□□□□ -1.67
LRIT2A6NDA9 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRIT2A6NDA9 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
LRIT2A6NDA9 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRIT2A6NDA9 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 AC083843.3-201ENST00000623679 2186 ntBASIC4.63□□□□□ -1.67
LRIT2A6NDA9 SNORA51.8-201ENST00000384234 132 ntBASIC4.63□□□□□ -1.67
LRIT2A6NDA9 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 RPL10P10-201ENST00000403509 664 ntBASIC4.63□□□□□ -1.67
LRIT2A6NDA9 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 AC114878.1-201ENST00000441166 358 ntBASIC4.63□□□□□ -1.67
LRIT2A6NDA9 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 SUMO2P1-206ENST00000445436 284 ntBASIC4.63□□□□□ -1.67
LRIT2A6NDA9 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 LARP7P4-201ENST00000481075 878 ntBASIC4.63□□□□□ -1.67
LRIT2A6NDA9 RN7SL346P-201ENST00000491561 294 ntBASIC4.63□□□□□ -1.67
LRIT2A6NDA9 RNU6-709P-201ENST00000517257 104 ntBASIC4.63□□□□□ -1.67
LRIT2A6NDA9 AC067904.2-201ENST00000517322 1283 ntBASIC4.63□□□□□ -1.67
LRIT2A6NDA9 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 OR4V1P-201ENST00000525394 1140 ntBASIC4.63□□□□□ -1.67
LRIT2A6NDA9 MORF4L1P3-201ENST00000525966 950 ntBASIC4.63□□□□□ -1.67
LRIT2A6NDA9 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 AC005229.3-201ENST00000603438 323 ntBASIC4.63□□□□□ -1.67
LRIT2A6NDA9 AL121932.1-201ENST00000605542 214 ntBASIC4.63□□□□□ -1.67
LRIT2A6NDA9 AC007620.3-201ENST00000608131 497 ntBASIC4.63□□□□□ -1.67
LRIT2A6NDA9 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 AC239803.2-201ENST00000610161 430 ntBASIC4.63□□□□□ -1.67
LRIT2A6NDA9 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 AC090510.2-201ENST00000617465 629 ntBASIC4.63□□□□□ -1.67
LRIT2A6NDA9 AC015914.2-201ENST00000618167 288 ntBASIC4.63□□□□□ -1.67
LRIT2A6NDA9 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 AC000374.1-201ENST00000434698 1745 ntBASIC4.63□□□□□ -1.67
LRIT2A6NDA9 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.63□□□□□ -1.67
LRIT2A6NDA9 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.63□□□□□ -1.67
LRIT2A6NDA9 IRF5P1-201ENST00000504852 2164 ntBASIC4.63□□□□□ -1.67
LRIT2A6NDA9 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 SMG1P6-201ENST00000532337 2930 ntBASIC4.62□□□□□ -1.67
LRIT2A6NDA9 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 OR5T3-201ENST00000303059 1023 ntBASIC4.62□□□□□ -1.67
LRIT2A6NDA9 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 RNU6-729P-201ENST00000384399 107 ntBASIC4.62□□□□□ -1.67
LRIT2A6NDA9 SNORD65-201ENST00000391079 73 ntBASIC4.62□□□□□ -1.67
LRIT2A6NDA9 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 TRIM60P13-201ENST00000432350 1283 ntBASIC4.62□□□□□ -1.67
LRIT2A6NDA9 HMGB3P10-201ENST00000434734 572 ntBASIC4.62□□□□□ -1.67
LRIT2A6NDA9 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 AC234781.3-201ENST00000452540 973 ntBASIC4.62□□□□□ -1.67
LRIT2A6NDA9 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 AC104629.2-201ENST00000468627 598 ntBASIC4.62□□□□□ -1.67
LRIT2A6NDA9 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 RPL7P16-201ENST00000479738 738 ntBASIC4.62□□□□□ -1.67
LRIT2A6NDA9 PCNAP1-201ENST00000505363 709 ntBASIC4.62□□□□□ -1.67
LRIT2A6NDA9 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 AC026616.1-201ENST00000523157 525 ntBASIC4.62□□□□□ -1.67
LRIT2A6NDA9 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 CYCSP40-201ENST00000575927 294 ntBASIC4.62□□□□□ -1.67
LRIT2A6NDA9 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.62□□□□□ -1.67
LRIT2A6NDA9 AC107308.1-201ENST00000615897 301 ntBASIC4.62□□□□□ -1.67
LRIT2A6NDA9 AC012414.7-202ENST00000622705 1090 ntBASIC4.62□□□□□ -1.67
LRIT2A6NDA9 AC006453.5-201ENST00000636451 619 ntBASIC4.62□□□□□ -1.67
LRIT2A6NDA9 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.62□□□□□ -1.67
LRIT2A6NDA9 DDX18P5-201ENST00000534547 1306 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms