Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SALL1Q9NSC2 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
SALL1Q9NSC2 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SALL1Q9NSC2 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SALL1Q9NSC2 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SALL1Q9NSC2 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SALL1Q9NSC2 NACAP7-201ENST00000407371 609 ntBASIC5.67□□□□□ -1.5
SALL1Q9NSC2 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.67□□□□□ -1.5
SALL1Q9NSC2 UQCRBP1-201ENST00000421129 336 ntBASIC5.67□□□□□ -1.5
SALL1Q9NSC2 RPL7P57-201ENST00000423238 740 ntBASIC5.67□□□□□ -1.5
SALL1Q9NSC2 AC091390.1-201ENST00000433904 331 ntBASIC5.67□□□□□ -1.5
SALL1Q9NSC2 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.67□□□□□ -1.5
SALL1Q9NSC2 NDUFA5P9-201ENST00000472609 340 ntBASIC5.67□□□□□ -1.5
SALL1Q9NSC2 RN7SL817P-201ENST00000480777 288 ntBASIC5.67□□□□□ -1.5
SALL1Q9NSC2 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SALL1Q9NSC2 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.67□□□□□ -1.5
SALL1Q9NSC2 AC007016.1-201ENST00000512110 244 ntBASIC5.67□□□□□ -1.5
SALL1Q9NSC2 NPM1P21-201ENST00000513394 762 ntBASIC5.67□□□□□ -1.5
SALL1Q9NSC2 RNA5SP249-201ENST00000516127 99 ntBASIC5.67□□□□□ -1.5
SALL1Q9NSC2 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.67□□□□□ -1.5
SALL1Q9NSC2 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.67□□□□□ -1.5
SALL1Q9NSC2 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.67□□□□□ -1.5
SALL1Q9NSC2 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.67□□□□□ -1.5
SALL1Q9NSC2 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.67□□□□□ -1.5
SALL1Q9NSC2 AC115286.1-201ENST00000604298 434 ntBASIC5.67□□□□□ -1.5
SALL1Q9NSC2 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.67□□□□□ -1.5
SALL1Q9NSC2 AC100847.1-201ENST00000611316 481 ntBASIC5.67□□□□□ -1.5
SALL1Q9NSC2 AC083809.1-201ENST00000615051 472 ntBASIC5.67□□□□□ -1.5
SALL1Q9NSC2 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SALL1Q9NSC2 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
SALL1Q9NSC2 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
SALL1Q9NSC2 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SALL1Q9NSC2 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SALL1Q9NSC2 AC022893.2-201ENST00000564832 3296 ntBASIC5.66□□□□□ -1.5
SALL1Q9NSC2 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 RPL12P28-201ENST00000430852 489 ntBASIC5.66□□□□□ -1.5
SALL1Q9NSC2 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 ARL2BPP10-201ENST00000446487 531 ntBASIC5.66□□□□□ -1.5
SALL1Q9NSC2 AC091153.1-201ENST00000466297 402 ntBASIC5.66□□□□□ -1.5
SALL1Q9NSC2 AC025674.1-201ENST00000507074 324 ntBASIC5.66□□□□□ -1.5
SALL1Q9NSC2 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 OR8A2P-201ENST00000528631 952 ntBASIC5.66□□□□□ -1.5
SALL1Q9NSC2 AC009643.1-201ENST00000532030 391 ntBASIC5.66□□□□□ -1.5
SALL1Q9NSC2 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 HMGN2P47-201ENST00000559378 272 ntBASIC5.66□□□□□ -1.5
SALL1Q9NSC2 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 AC005191.1-201ENST00000603950 358 ntBASIC5.66□□□□□ -1.5
SALL1Q9NSC2 AL133338.2-201ENST00000604292 736 ntBASIC5.66□□□□□ -1.5
SALL1Q9NSC2 AC011815.3-201ENST00000624194 473 ntBASIC5.66□□□□□ -1.5
SALL1Q9NSC2 U3.53-201ENST00000628922 216 ntBASIC5.66□□□□□ -1.5
SALL1Q9NSC2 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.66□□□□□ -1.5
SALL1Q9NSC2 CASC19-206ENST00000641028 1430 ntBASIC5.66□□□□□ -1.5
SALL1Q9NSC2 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.66□□□□□ -1.5
SALL1Q9NSC2 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.65□□□□□ -1.5
SALL1Q9NSC2 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
SALL1Q9NSC2 OR14L1P-202ENST00000641545 3009 ntBASIC5.65□□□□□ -1.5
SALL1Q9NSC2 AL031119.1-201ENST00000404707 1879 ntBASIC5.65□□□□□ -1.5
SALL1Q9NSC2 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.65□□□□□ -1.5
SALL1Q9NSC2 AC133552.1-201ENST00000569988 4007 ntBASIC5.65□□□□□ -1.5
SALL1Q9NSC2 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SALL1Q9NSC2 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SALL1Q9NSC2 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SALL1Q9NSC2 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SALL1Q9NSC2 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SALL1Q9NSC2 SNORA62-201ENST00000365493 153 ntBASIC5.65□□□□□ -1.51
SALL1Q9NSC2 AC068538.1-201ENST00000376856 336 ntBASIC5.65□□□□□ -1.51
SALL1Q9NSC2 AP000580.1-201ENST00000404439 358 ntBASIC5.65□□□□□ -1.51
SALL1Q9NSC2 RPL36AP10-201ENST00000421785 322 ntBASIC5.65□□□□□ -1.51
SALL1Q9NSC2 C4BPAP2-201ENST00000428434 478 ntBASIC5.65□□□□□ -1.51
SALL1Q9NSC2 RPS26P4-201ENST00000431743 355 ntBASIC5.65□□□□□ -1.51
SALL1Q9NSC2 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.65□□□□□ -1.51
SALL1Q9NSC2 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.65□□□□□ -1.51
SALL1Q9NSC2 EIF2S2P2-201ENST00000447161 982 ntBASIC5.65□□□□□ -1.51
SALL1Q9NSC2 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.65□□□□□ -1.51
SALL1Q9NSC2 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.65□□□□□ -1.51
SALL1Q9NSC2 AC090142.1-201ENST00000465776 462 ntBASIC5.65□□□□□ -1.51
SALL1Q9NSC2 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.65□□□□□ -1.51
SALL1Q9NSC2 AP001781.1-201ENST00000530977 207 ntBASIC5.65□□□□□ -1.51
SALL1Q9NSC2 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.65□□□□□ -1.51
SALL1Q9NSC2 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.65□□□□□ -1.51
SALL1Q9NSC2 AC084783.1-201ENST00000565846 910 ntBASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms