Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.51□□□□□ -1.69
LRRC58Q96CX6 AC234781.4-201ENST00000419384 244 ntBASIC4.51□□□□□ -1.69
LRRC58Q96CX6 LINC00993-201ENST00000420453 540 ntBASIC4.51□□□□□ -1.69
LRRC58Q96CX6 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LRRC58Q96CX6 SETP10-201ENST00000424368 814 ntBASIC4.51□□□□□ -1.69
LRRC58Q96CX6 TRGV7-201ENST00000427089 353 ntBASIC4.51□□□□□ -1.69
LRRC58Q96CX6 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.51□□□□□ -1.69
LRRC58Q96CX6 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.51□□□□□ -1.69
LRRC58Q96CX6 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.51□□□□□ -1.69
LRRC58Q96CX6 AL389915.2-201ENST00000454576 441 ntBASIC4.51□□□□□ -1.69
LRRC58Q96CX6 RPL23AP56-201ENST00000460778 453 ntBASIC4.51□□□□□ -1.69
LRRC58Q96CX6 RN7SL41P-201ENST00000476144 297 ntBASIC4.51□□□□□ -1.69
LRRC58Q96CX6 RN7SL319P-201ENST00000480656 221 ntBASIC4.51□□□□□ -1.69
LRRC58Q96CX6 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.51□□□□□ -1.69
LRRC58Q96CX6 STMN1P2-201ENST00000508435 439 ntBASIC4.51□□□□□ -1.69
LRRC58Q96CX6 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.51□□□□□ -1.69
LRRC58Q96CX6 AC011447.4-201ENST00000587562 111 ntBASIC4.51□□□□□ -1.69
LRRC58Q96CX6 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.51□□□□□ -1.69
LRRC58Q96CX6 AC126915.2-201ENST00000610957 190 ntBASIC4.51□□□□□ -1.69
LRRC58Q96CX6 AL121612.2-201ENST00000612261 482 ntBASIC4.51□□□□□ -1.69
LRRC58Q96CX6 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.51□□□□□ -1.69
LRRC58Q96CX6 AL139407.1-201ENST00000613826 1175 ntBASIC4.51□□□□□ -1.69
LRRC58Q96CX6 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.51□□□□□ -1.69
LRRC58Q96CX6 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.51□□□□□ -1.69
LRRC58Q96CX6 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.51□□□□□ -1.69
LRRC58Q96CX6 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LRRC58Q96CX6 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRRC58Q96CX6 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
LRRC58Q96CX6 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LRRC58Q96CX6 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRRC58Q96CX6 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.51□□□□□ -1.69
LRRC58Q96CX6 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LRRC58Q96CX6 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
LRRC58Q96CX6 MTCO1P15-201ENST00000529569 1526 ntBASIC4.51□□□□□ -1.69
LRRC58Q96CX6 SAMMSON-213ENST00000641336 1521 ntBASIC4.51□□□□□ -1.69
LRRC58Q96CX6 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.51□□□□□ -1.69
LRRC58Q96CX6 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRRC58Q96CX6 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 AC093909.5-201ENST00000621839 1799 ntBASIC4.5□□□□□ -1.69
LRRC58Q96CX6 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 RNA5SP428-201ENST00000365129 132 ntBASIC4.5□□□□□ -1.69
LRRC58Q96CX6 RNA5SP455-201ENST00000365190 119 ntBASIC4.5□□□□□ -1.69
LRRC58Q96CX6 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 RNU2-22P-201ENST00000411266 212 ntBASIC4.5□□□□□ -1.69
LRRC58Q96CX6 GTF2IP5-201ENST00000414608 731 ntBASIC4.5□□□□□ -1.69
LRRC58Q96CX6 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 RHOT1P3-201ENST00000436571 331 ntBASIC4.5□□□□□ -1.69
LRRC58Q96CX6 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 AC245047.2-201ENST00000441060 530 ntBASIC4.5□□□□□ -1.69
LRRC58Q96CX6 OR52Y1P-201ENST00000452418 828 ntBASIC4.5□□□□□ -1.69
LRRC58Q96CX6 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 AP005901.4-201ENST00000577336 569 ntBASIC4.5□□□□□ -1.69
LRRC58Q96CX6 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 AL445222.1-201ENST00000607259 628 ntBASIC4.5□□□□□ -1.69
LRRC58Q96CX6 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.5□□□□□ -1.69
LRRC58Q96CX6 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LRRC58Q96CX6 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LRRC58Q96CX6 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LRRC58Q96CX6 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LRRC58Q96CX6 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.49□□□□□ -1.69
LRRC58Q96CX6 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.49□□□□□ -1.69
LRRC58Q96CX6 AL136164.3-201ENST00000624429 3978 ntBASIC4.49□□□□□ -1.69
LRRC58Q96CX6 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRRC58Q96CX6 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LRRC58Q96CX6 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LRRC58Q96CX6 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRRC58Q96CX6 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LRRC58Q96CX6 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.49□□□□□ -1.69
LRRC58Q96CX6 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.49□□□□□ -1.69
LRRC58Q96CX6 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
LRRC58Q96CX6 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRRC58Q96CX6 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.49□□□□□ -1.69
LRRC58Q96CX6 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.49□□□□□ -1.69
LRRC58Q96CX6 PDSS1P1-201ENST00000422953 1114 ntBASIC4.49□□□□□ -1.69
LRRC58Q96CX6 AL645608.4-201ENST00000423619 154 ntBASIC4.49□□□□□ -1.69
LRRC58Q96CX6 AC005033.1-201ENST00000428904 813 ntBASIC4.49□□□□□ -1.69
LRRC58Q96CX6 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.49□□□□□ -1.69
LRRC58Q96CX6 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.49□□□□□ -1.69
LRRC58Q96CX6 SUMO2P1-206ENST00000445436 284 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms