Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 IGLV3-30-201ENST00000524362 298 ntBASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 MTCO2P15-201ENST00000532655 656 ntBASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 AC025260.1-201ENST00000548858 430 ntBASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 MIR3614-201ENST00000581261 86 ntBASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 AC008507.3-201ENST00000585753 472 ntBASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 AC131159.1-201ENST00000621854 213 ntBASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 AC011815.3-201ENST00000624194 473 ntBASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 AL390318.1-201ENST00000624564 687 ntBASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 RBPJP7-201ENST00000442803 1447 ntBASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 RBPJP5-201ENST00000449433 1447 ntBASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 GNL2P1-201ENST00000451274 2190 ntBASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 AC092079.1-201ENST00000558620 1985 ntBASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SIMC1Q8NDZ2 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AL591135.1-201ENST00000401578 5914 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AC011933.2-201ENST00000578539 2790 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AC130304.1-201ENST00000622942 2385 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 SELENOWP1-201ENST00000322792 252 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 MIR323A-201ENST00000362199 86 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 RNA5SP273-201ENST00000362484 113 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 SFR1P1-201ENST00000403720 688 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AC002524.1-201ENST00000411687 547 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 NPM1P40-201ENST00000412758 733 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 VTA1P1-201ENST00000414044 866 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 RPS3P2-201ENST00000421346 701 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 RPS24P8-201ENST00000431490 402 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AC084290.1-201ENST00000434995 374 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AC005077.1-201ENST00000449226 375 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 RPL21P6-201ENST00000479171 504 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 RPL7AP10-201ENST00000481016 791 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 RN7SL193P-201ENST00000491708 276 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AC083795.1-201ENST00000491760 320 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AC093890.1-201ENST00000502554 540 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 LSM3P4-201ENST00000502948 309 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 MTND1P5-201ENST00000517906 940 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AC027308.1-201ENST00000517993 110 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 OR4A2P-201ENST00000527276 913 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AP000926.4-201ENST00000527351 454 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AC024909.2-201ENST00000553035 286 ntBASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.54□□□□□ -1.52
SIMC1Q8NDZ2 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms