Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
VARS2Q5ST30 AL590806.1-201ENST00000415818 853 ntBASIC8.12□□□□□ -1.11
VARS2Q5ST30 RPSAP1-201ENST00000421328 880 ntBASIC8.12□□□□□ -1.11
VARS2Q5ST30 AC019097.1-201ENST00000424783 735 ntBASIC8.12□□□□□ -1.11
VARS2Q5ST30 SNX18P3-201ENST00000424993 835 ntBASIC8.12□□□□□ -1.11
VARS2Q5ST30 AC104837.2-201ENST00000427236 424 ntBASIC8.12□□□□□ -1.11
VARS2Q5ST30 VDAC2P3-201ENST00000430995 828 ntBASIC8.12□□□□□ -1.11
VARS2Q5ST30 NEFMP1-201ENST00000443423 1006 ntBASIC8.12□□□□□ -1.11
VARS2Q5ST30 CDC42P2-201ENST00000448566 569 ntBASIC8.12□□□□□ -1.11
VARS2Q5ST30 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC8.12□□□□□ -1.11
VARS2Q5ST30 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC8.12□□□□□ -1.11
VARS2Q5ST30 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC8.12□□□□□ -1.11
VARS2Q5ST30 AL138752.1-201ENST00000452964 351 ntBASIC8.12□□□□□ -1.11
VARS2Q5ST30 AC233724.1-201ENST00000503894 233 ntBASIC8.12□□□□□ -1.11
VARS2Q5ST30 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC8.12□□□□□ -1.11
VARS2Q5ST30 RNU6-1220P-201ENST00000517126 108 ntBASIC8.12□□□□□ -1.11
VARS2Q5ST30 MYL12AP1-201ENST00000518490 515 ntBASIC8.12□□□□□ -1.11
VARS2Q5ST30 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC8.12□□□□□ -1.11
VARS2Q5ST30 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC8.12□□□□□ -1.11
VARS2Q5ST30 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
VARS2Q5ST30 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC8.12□□□□□ -1.11
VARS2Q5ST30 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
VARS2Q5ST30 BX664608.1-201ENST00000610519 487 ntBASIC8.12□□□□□ -1.11
VARS2Q5ST30 AC006335.3-201ENST00000613408 292 ntBASIC8.12□□□□□ -1.11
VARS2Q5ST30 AL121985.3-201ENST00000620690 523 ntBASIC8.12□□□□□ -1.11
VARS2Q5ST30 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC8.12□□□□□ -1.11
VARS2Q5ST30 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
VARS2Q5ST30 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
VARS2Q5ST30 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
VARS2Q5ST30 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
VARS2Q5ST30 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC8.12□□□□□ -1.11
VARS2Q5ST30 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
VARS2Q5ST30 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC8.12□□□□□ -1.11
VARS2Q5ST30 ACTR3BP5-201ENST00000448440 1479 ntBASIC8.12□□□□□ -1.11
VARS2Q5ST30 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
VARS2Q5ST30 RN7SKP23-201ENST00000625159 4301 ntBASIC8.12□□□□□ -1.11
VARS2Q5ST30 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC8.12□□□□□ -1.11
VARS2Q5ST30 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC8.12□□□□□ -1.11
VARS2Q5ST30 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
VARS2Q5ST30 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
VARS2Q5ST30 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
VARS2Q5ST30 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
VARS2Q5ST30 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
VARS2Q5ST30 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
VARS2Q5ST30 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
VARS2Q5ST30 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
VARS2Q5ST30 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
VARS2Q5ST30 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
VARS2Q5ST30 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
VARS2Q5ST30 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 RNU6-490P-201ENST00000362985 107 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 MIR138-2-201ENST00000384916 84 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 MIR555-201ENST00000384987 96 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 SNORA75.6-201ENST00000391318 127 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
VARS2Q5ST30 RNA5SP198-201ENST00000410376 127 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 RN7SKP30-201ENST00000411373 334 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 AL450992.3-201ENST00000413192 568 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 GAPDHP73-201ENST00000423411 1007 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 RPL7P4-203ENST00000430239 730 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 AC097527.1-201ENST00000437031 530 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 CXCR2P1-202ENST00000443392 1074 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 AC073910.1-201ENST00000445047 438 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 MTND1P17-201ENST00000448961 204 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 TDGF1P6-201ENST00000463873 448 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 SCG5-207ENST00000497208 949 ntTSL 5 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 OR52H2P-201ENST00000514607 902 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 RNU6-150P-201ENST00000516237 95 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 RNU6-201P-201ENST00000517100 61 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 SNORD116.3-201ENST00000517176 78 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 IGLVVI-25-1-201ENST00000521893 249 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 AC022616.3-201ENST00000523940 148 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 AP001804.2-201ENST00000533932 910 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 HSPE1P20-201ENST00000538133 289 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 AC016629.2-201ENST00000597341 199 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 AC092447.9-201ENST00000603395 144 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
VARS2Q5ST30 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
VARS2Q5ST30 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 ASB8-218ENST00000629941 278 ntTSL 5 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
VARS2Q5ST30 XRCC6P5-201ENST00000435236 1795 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 API5-210ENST00000534600 1760 ntTSL 5 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms