Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.95□□□□□ -1.62
PDX1P52945 MTCYBP7-201ENST00000419540 1134 ntBASIC4.95□□□□□ -1.62
PDX1P52945 HSPD1P12-201ENST00000429127 1069 ntBASIC4.95□□□□□ -1.62
PDX1P52945 AC124944.2-201ENST00000429866 1242 ntBASIC4.95□□□□□ -1.62
PDX1P52945 UBE2V1P6-201ENST00000430840 422 ntBASIC4.95□□□□□ -1.62
PDX1P52945 AC090018.1-201ENST00000434369 367 ntBASIC4.95□□□□□ -1.62
PDX1P52945 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.95□□□□□ -1.62
PDX1P52945 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PDX1P52945 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.95□□□□□ -1.62
PDX1P52945 TPT1P13-201ENST00000449760 499 ntBASIC4.95□□□□□ -1.62
PDX1P52945 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.95□□□□□ -1.62
PDX1P52945 MTND2P6-201ENST00000455337 1030 ntBASIC4.95□□□□□ -1.62
PDX1P52945 RPL5P22-201ENST00000480199 884 ntBASIC4.95□□□□□ -1.62
PDX1P52945 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.95□□□□□ -1.62
PDX1P52945 AC140172.1-201ENST00000502928 141 ntBASIC4.95□□□□□ -1.62
PDX1P52945 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.95□□□□□ -1.62
PDX1P52945 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.95□□□□□ -1.62
PDX1P52945 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.95□□□□□ -1.62
PDX1P52945 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.95□□□□□ -1.62
PDX1P52945 RNU6-1102P-201ENST00000516149 96 ntBASIC4.95□□□□□ -1.62
PDX1P52945 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.95□□□□□ -1.62
PDX1P52945 MTCO3P22-201ENST00000603219 784 ntBASIC4.95□□□□□ -1.62
PDX1P52945 AC008745.1-201ENST00000604064 271 ntBASIC4.95□□□□□ -1.62
PDX1P52945 AP005432.2-201ENST00000608162 586 ntBASIC4.95□□□□□ -1.62
PDX1P52945 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
PDX1P52945 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PDX1P52945 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.95□□□□□ -1.62
PDX1P52945 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.95□□□□□ -1.62
PDX1P52945 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
PDX1P52945 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDX1P52945 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
PDX1P52945 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.95□□□□□ -1.62
PDX1P52945 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
PDX1P52945 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDX1P52945 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
PDX1P52945 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.95□□□□□ -1.62
PDX1P52945 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
PDX1P52945 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDX1P52945 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDX1P52945 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDX1P52945 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDX1P52945 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDX1P52945 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDX1P52945 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.94□□□□□ -1.62
PDX1P52945 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDX1P52945 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDX1P52945 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.94□□□□□ -1.62
PDX1P52945 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.94□□□□□ -1.62
PDX1P52945 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.94□□□□□ -1.62
PDX1P52945 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDX1P52945 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.94□□□□□ -1.62
PDX1P52945 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
PDX1P52945 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDX1P52945 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDX1P52945 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PDX1P52945 GAPDHP15-201ENST00000398586 975 ntBASIC4.94□□□□□ -1.62
PDX1P52945 AC019050.1-201ENST00000418508 492 ntBASIC4.94□□□□□ -1.62
PDX1P52945 AL136231.1-201ENST00000429407 730 ntBASIC4.94□□□□□ -1.62
PDX1P52945 RPS29P10-201ENST00000439197 166 ntBASIC4.94□□□□□ -1.62
PDX1P52945 AL138878.2-201ENST00000440581 1241 ntBASIC4.94□□□□□ -1.62
PDX1P52945 AL513321.1-201ENST00000441175 761 ntBASIC4.94□□□□□ -1.62
PDX1P52945 RPL21P133-201ENST00000443666 476 ntBASIC4.94□□□□□ -1.62
PDX1P52945 AC096741.1-201ENST00000472250 846 ntBASIC4.94□□□□□ -1.62
PDX1P52945 RN7SL459P-201ENST00000481078 302 ntBASIC4.94□□□□□ -1.62
PDX1P52945 RN7SL205P-201ENST00000490174 284 ntBASIC4.94□□□□□ -1.62
PDX1P52945 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.94□□□□□ -1.62
PDX1P52945 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.94□□□□□ -1.62
PDX1P52945 COX6B1P5-201ENST00000509843 249 ntBASIC4.94□□□□□ -1.62
PDX1P52945 AC034244.2-201ENST00000514668 858 ntBASIC4.94□□□□□ -1.62
PDX1P52945 AC027338.1-201ENST00000514840 825 ntBASIC4.94□□□□□ -1.62
PDX1P52945 RNA5SP43-201ENST00000516559 110 ntBASIC4.94□□□□□ -1.62
PDX1P52945 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.94□□□□□ -1.62
PDX1P52945 OR7E128P-201ENST00000532736 1024 ntBASIC4.94□□□□□ -1.62
PDX1P52945 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.94□□□□□ -1.62
PDX1P52945 GCSHP4-201ENST00000538792 439 ntBASIC4.94□□□□□ -1.62
PDX1P52945 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.94□□□□□ -1.62
PDX1P52945 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.94□□□□□ -1.62
PDX1P52945 AC106785.3-201ENST00000564064 847 ntBASIC4.94□□□□□ -1.62
PDX1P52945 RN7SL52P-201ENST00000584271 284 ntBASIC4.94□□□□□ -1.62
PDX1P52945 AC010487.1-201ENST00000594408 1172 ntBASIC4.94□□□□□ -1.62
PDX1P52945 ZNF92P2-201ENST00000600543 1059 ntBASIC4.94□□□□□ -1.62
PDX1P52945 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.94□□□□□ -1.62
PDX1P52945 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.94□□□□□ -1.62
PDX1P52945 AL162431.4-201ENST00000604674 411 ntBASIC4.94□□□□□ -1.62
PDX1P52945 AP004372.1-201ENST00000604842 844 ntBASIC4.94□□□□□ -1.62
PDX1P52945 AC135178.6-201ENST00000605314 398 ntBASIC4.94□□□□□ -1.62
PDX1P52945 AL161616.1-201ENST00000611867 286 ntBASIC4.94□□□□□ -1.62
PDX1P52945 RN7SL722P-201ENST00000617780 284 ntBASIC4.94□□□□□ -1.62
PDX1P52945 RN7SL565P-201ENST00000618246 284 ntBASIC4.94□□□□□ -1.62
PDX1P52945 AP000346.3-201ENST00000622821 210 ntBASIC4.94□□□□□ -1.62
PDX1P52945 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDX1P52945 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.94□□□□□ -1.62
PDX1P52945 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.94□□□□□ -1.62
PDX1P52945 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDX1P52945 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.94□□□□□ -1.62
PDX1P52945 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.94□□□□□ -1.62
PDX1P52945 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.94□□□□□ -1.62
PDX1P52945 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDX1P52945 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDX1P52945 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms