Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 SOX5P1-201ENST00000524155 1127 ntBASIC5.64□□□□□ -1.51
TOP1P11387 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.64□□□□□ -1.51
TOP1P11387 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.64□□□□□ -1.51
TOP1P11387 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.64□□□□□ -1.51
TOP1P11387 AL161616.1-201ENST00000611867 286 ntBASIC5.64□□□□□ -1.51
TOP1P11387 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TOP1P11387 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TOP1P11387 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TOP1P11387 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
TOP1P11387 AP000542.2-201ENST00000623199 6179 ntBASIC5.63□□□□□ -1.51
TOP1P11387 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.63□□□□□ -1.51
TOP1P11387 RLIMP2-201ENST00000427891 1563 ntBASIC5.63□□□□□ -1.51
TOP1P11387 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.63□□□□□ -1.51
TOP1P11387 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TOP1P11387 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TOP1P11387 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.63□□□□□ -1.51
TOP1P11387 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TOP1P11387 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TOP1P11387 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
TOP1P11387 TLK1P1-201ENST00000456760 2440 ntBASIC5.63□□□□□ -1.51
TOP1P11387 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TOP1P11387 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.63□□□□□ -1.51
TOP1P11387 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TOP1P11387 UBBP2-201ENST00000376781 231 ntBASIC5.63□□□□□ -1.51
TOP1P11387 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TOP1P11387 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TOP1P11387 CYB5AP4-201ENST00000396692 399 ntBASIC5.63□□□□□ -1.51
TOP1P11387 MIR1271-201ENST00000408537 86 ntBASIC5.63□□□□□ -1.51
TOP1P11387 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.63□□□□□ -1.51
TOP1P11387 FABP7P2-201ENST00000429946 379 ntBASIC5.63□□□□□ -1.51
TOP1P11387 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TOP1P11387 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.63□□□□□ -1.51
TOP1P11387 GYG1P1-201ENST00000460864 698 ntBASIC5.63□□□□□ -1.51
TOP1P11387 AL591473.1-201ENST00000464297 313 ntBASIC5.63□□□□□ -1.51
TOP1P11387 AC006967.1-201ENST00000467608 589 ntBASIC5.63□□□□□ -1.51
TOP1P11387 RPS27AP18-201ENST00000515536 459 ntBASIC5.63□□□□□ -1.51
TOP1P11387 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.63□□□□□ -1.51
TOP1P11387 AC063949.1-201ENST00000552900 865 ntBASIC5.63□□□□□ -1.51
TOP1P11387 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
TOP1P11387 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.63□□□□□ -1.51
TOP1P11387 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.63□□□□□ -1.51
TOP1P11387 MIR5699-201ENST00000578903 90 ntBASIC5.63□□□□□ -1.51
TOP1P11387 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.63□□□□□ -1.51
TOP1P11387 AC087283.1-201ENST00000604029 1074 ntBASIC5.63□□□□□ -1.51
TOP1P11387 AC067838.1-201ENST00000606064 577 ntBASIC5.63□□□□□ -1.51
TOP1P11387 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.63□□□□□ -1.51
TOP1P11387 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TOP1P11387 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.63□□□□□ -1.51
TOP1P11387 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.63□□□□□ -1.51
TOP1P11387 AC093591.2-201ENST00000565254 3843 ntBASIC5.63□□□□□ -1.51
TOP1P11387 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.63□□□□□ -1.51
TOP1P11387 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
TOP1P11387 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
TOP1P11387 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.63□□□□□ -1.51
TOP1P11387 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
TOP1P11387 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TOP1P11387 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.62□□□□□ -1.51
TOP1P11387 AL359643.1-201ENST00000404109 423 ntBASIC5.62□□□□□ -1.51
TOP1P11387 AL590139.1-201ENST00000416267 400 ntBASIC5.62□□□□□ -1.51
TOP1P11387 AL451139.1-201ENST00000434718 346 ntBASIC5.62□□□□□ -1.51
TOP1P11387 CYCSP11-201ENST00000436426 315 ntBASIC5.62□□□□□ -1.51
TOP1P11387 AL031584.1-201ENST00000447169 754 ntBASIC5.62□□□□□ -1.51
TOP1P11387 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.62□□□□□ -1.51
TOP1P11387 AL513533.1-201ENST00000453728 415 ntBASIC5.62□□□□□ -1.51
TOP1P11387 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.62□□□□□ -1.51
TOP1P11387 AP002371.1-201ENST00000463604 433 ntBASIC5.62□□□□□ -1.51
TOP1P11387 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.62□□□□□ -1.51
TOP1P11387 ENPP7P9-201ENST00000514456 627 ntBASIC5.62□□□□□ -1.51
TOP1P11387 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.62□□□□□ -1.51
TOP1P11387 AC138938.1-201ENST00000515431 782 ntBASIC5.62□□□□□ -1.51
TOP1P11387 RNA5SP249-201ENST00000516127 99 ntBASIC5.62□□□□□ -1.51
TOP1P11387 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.62□□□□□ -1.51
TOP1P11387 HNRNPRP2-201ENST00000528421 743 ntBASIC5.62□□□□□ -1.51
TOP1P11387 AC005868.1-201ENST00000536421 331 ntBASIC5.62□□□□□ -1.51
TOP1P11387 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.62□□□□□ -1.51
TOP1P11387 AC137768.1-201ENST00000549998 553 ntBASIC5.62□□□□□ -1.51
TOP1P11387 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.62□□□□□ -1.51
TOP1P11387 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.62□□□□□ -1.51
TOP1P11387 AL049830.4-201ENST00000555149 351 ntBASIC5.62□□□□□ -1.51
TOP1P11387 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.62□□□□□ -1.51
TOP1P11387 AC104785.1-201ENST00000603220 588 ntBASIC5.62□□□□□ -1.51
TOP1P11387 AC087468.1-201ENST00000604365 630 ntBASIC5.62□□□□□ -1.51
TOP1P11387 MIR6780A-201ENST00000615089 68 ntBASIC5.62□□□□□ -1.51
TOP1P11387 AL589935.2-201ENST00000616471 1231 ntBASIC5.62□□□□□ -1.51
TOP1P11387 AC022106.2-201ENST00000620114 757 ntBASIC5.62□□□□□ -1.51
TOP1P11387 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.62□□□□□ -1.51
TOP1P11387 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.62□□□□□ -1.51
TOP1P11387 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TOP1P11387 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
TOP1P11387 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TOP1P11387 AC083843.2-201ENST00000568248 6253 ntBASIC5.61□□□□□ -1.51
TOP1P11387 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TOP1P11387 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TOP1P11387 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TOP1P11387 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TOP1P11387 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TOP1P11387 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
TOP1P11387 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TOP1P11387 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TOP1P11387 SETP15-201ENST00000412724 337 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms