Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC010624.4-201ENST00000597606 1351 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AC062022.1-201ENST00000451026 1684 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 GDI2P1-201ENST00000429312 1336 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 TTC41P-205ENST00000551270 3963 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 RNU4-81P-201ENST00000363561 144 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 RNU6-1090P-201ENST00000364065 94 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 SNORA70.5-201ENST00000365519 135 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 RN7SKP1-201ENST00000365525 307 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 RNU1-46P-201ENST00000384425 164 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AL359715.1-201ENST00000404330 555 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 RNU2-5P-201ENST00000410533 180 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AC017078.1-201ENST00000416146 368 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 USP9YP27-201ENST00000418455 438 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AL157884.1-201ENST00000424561 454 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 MED15P9-201ENST00000424716 533 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 MTCO1P20-201ENST00000425366 358 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AC109583.1-201ENST00000432156 268 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AC016489.1-201ENST00000461109 375 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AC092757.1-201ENST00000467293 467 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AC023598.1-201ENST00000472521 361 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AL161747.1-201ENST00000480068 358 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 KLRA1P-201ENST00000503499 986 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 NDUFA5P12-201ENST00000503796 343 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AC097460.2-201ENST00000511857 741 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AC026412.2-201ENST00000512270 1075 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AP003084.1-201ENST00000524828 742 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 ZNF322P1-201ENST00000568013 1209 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 MIR3682-201ENST00000581338 84 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 STARD6-204ENST00000584040 660 ntTSL 3 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AC012065.3-201ENST00000602736 439 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AL352984.2-202ENST00000613699 155 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AC231657.1-201ENST00000624313 397 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AC116563.2-201ENST00000624751 535 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AC102941.1-201ENST00000567616 1537 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 OR4G11P-202ENST00000642116 1414 ntBASIC5.82□□□□□ -1.48
SHISA3A0PJX4 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 DOCK11P1-201ENST00000553480 5932 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC011369.2-201ENST00000624423 1567 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 GMFG-201ENST00000253054 616 ntTSL 5 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 SNORD8-201ENST00000363915 110 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 RNU6-877P-201ENST00000383868 107 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 RNU6-780P-201ENST00000391030 104 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AL450338.1-201ENST00000407987 512 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 RNU2-65P-201ENST00000410162 185 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AL136133.1-201ENST00000413694 376 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC127526.2-201ENST00000426436 775 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 NPM1P24-201ENST00000428039 894 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms