Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.55□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.55□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.55□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AL589674.2-201ENST00000604304 337 ntBASIC4.55□□□□□ -1.68
TRBV4-1A0A0J9YWV2 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.55□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AC074140.1-201ENST00000621617 208 ntBASIC4.55□□□□□ -1.68
TRBV4-1A0A0J9YWV2 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.55□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AC106858.1-201ENST00000637497 429 ntBASIC4.55□□□□□ -1.68
TRBV4-1A0A0J9YWV2 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRBV4-1A0A0J9YWV2 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.55□□□□□ -1.68
TRBV4-1A0A0J9YWV2 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.55□□□□□ -1.68
TRBV4-1A0A0J9YWV2 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRBV4-1A0A0J9YWV2 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
TRBV4-1A0A0J9YWV2 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRBV4-1A0A0J9YWV2 CASC19-206ENST00000641028 1430 ntBASIC4.55□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRBV4-1A0A0J9YWV2 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 UGT2B26P-201ENST00000508672 1613 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 DDX18P5-201ENST00000534547 1306 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 RNU6-1176P-201ENST00000390955 107 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 TAF9BP2-201ENST00000400856 499 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AL592291.1-201ENST00000403830 352 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 GTF3AP1-201ENST00000416942 1004 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 RGS17P1-201ENST00000423358 553 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 UBE2D3P3-201ENST00000426992 425 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 RPL23AP4-201ENST00000427757 463 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 BX119904.1-201ENST00000432026 348 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 EIF2S2P5-201ENST00000457635 968 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 RPS4XP12-201ENST00000461747 709 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 NPM1P29-201ENST00000483112 803 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AC008410.1-201ENST00000483777 339 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 PPIAP19-201ENST00000486414 492 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AC073358.1-201ENST00000505671 684 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AP000859.1-201ENST00000525536 307 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AC019227.1-201ENST00000526902 510 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AC093591.2-201ENST00000565254 3843 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 CBX3P2-202ENST00000583365 535 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AC015911.5-201ENST00000587076 451 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AC006272.2-201ENST00000594725 163 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AC084373.1-201ENST00000603311 235 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AC120053.1-201ENST00000607706 736 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AL391262.2-201ENST00000622466 494 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 FRG1DP-201ENST00000635586 771 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AC107068.1-201ENST00000563286 4218 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AC104260.2-201ENST00000623551 3497 ntBASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRBV4-1A0A0J9YWV2 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.53□□□□□ -1.68
TRBV4-1A0A0J9YWV2 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRBV4-1A0A0J9YWV2 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TRBV4-1A0A0J9YWV2 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRBV4-1A0A0J9YWV2 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRBV4-1A0A0J9YWV2 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
TRBV4-1A0A0J9YWV2 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TRBV4-1A0A0J9YWV2 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
TRBV4-1A0A0J9YWV2 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.53□□□□□ -1.68
TRBV4-1A0A0J9YWV2 AC104297.1-201ENST00000393779 870 ntBASIC4.53□□□□□ -1.68
TRBV4-1A0A0J9YWV2 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
TRBV4-1A0A0J9YWV2 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms