Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC8□□□□□ -1.13
ZC3H4Q9UPT8 RNA5SP443-201ENST00000363083 132 ntBASIC8□□□□□ -1.13
ZC3H4Q9UPT8 Y_RNA.263-201ENST00000364659 114 ntBASIC8□□□□□ -1.13
ZC3H4Q9UPT8 RN7SKP292-201ENST00000365522 317 ntBASIC8□□□□□ -1.13
ZC3H4Q9UPT8 MIR105-2-201ENST00000385083 81 ntBASIC8□□□□□ -1.13
ZC3H4Q9UPT8 RNU6-244P-201ENST00000391028 104 ntBASIC8□□□□□ -1.13
ZC3H4Q9UPT8 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
ZC3H4Q9UPT8 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC8□□□□□ -1.13
ZC3H4Q9UPT8 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC8□□□□□ -1.13
ZC3H4Q9UPT8 KCTD9P3-201ENST00000434597 1169 ntBASIC8□□□□□ -1.13
ZC3H4Q9UPT8 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC8□□□□□ -1.13
ZC3H4Q9UPT8 AL353093.1-201ENST00000441292 436 ntBASIC8□□□□□ -1.13
ZC3H4Q9UPT8 DNAJC19P8-201ENST00000452887 259 ntBASIC8□□□□□ -1.13
ZC3H4Q9UPT8 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC8□□□□□ -1.13
ZC3H4Q9UPT8 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC8□□□□□ -1.13
ZC3H4Q9UPT8 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC8□□□□□ -1.13
ZC3H4Q9UPT8 MTCYBP18-201ENST00000501056 747 ntBASIC8□□□□□ -1.13
ZC3H4Q9UPT8 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC8□□□□□ -1.13
ZC3H4Q9UPT8 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
ZC3H4Q9UPT8 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC8□□□□□ -1.13
ZC3H4Q9UPT8 IMPA1P1-201ENST00000510718 842 ntBASIC8□□□□□ -1.13
ZC3H4Q9UPT8 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC8□□□□□ -1.13
ZC3H4Q9UPT8 Y_RNA.701-201ENST00000516812 110 ntBASIC8□□□□□ -1.13
ZC3H4Q9UPT8 EEF1B2P2-201ENST00000519625 676 ntBASIC8□□□□□ -1.13
ZC3H4Q9UPT8 AC027544.3-201ENST00000535082 757 ntBASIC8□□□□□ -1.13
ZC3H4Q9UPT8 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC8□□□□□ -1.13
ZC3H4Q9UPT8 AC007956.1-201ENST00000555623 542 ntBASIC8□□□□□ -1.13
ZC3H4Q9UPT8 AC137800.2-201ENST00000574375 120 ntBASIC8□□□□□ -1.13
ZC3H4Q9UPT8 AC060780.3-201ENST00000589464 80 ntBASIC8□□□□□ -1.13
ZC3H4Q9UPT8 AC125494.2-201ENST00000602431 657 ntBASIC8□□□□□ -1.13
ZC3H4Q9UPT8 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC8□□□□□ -1.13
ZC3H4Q9UPT8 AP000942.4-201ENST00000604811 241 ntBASIC8□□□□□ -1.13
ZC3H4Q9UPT8 AL590282.1-201ENST00000610379 1136 ntBASIC8□□□□□ -1.13
ZC3H4Q9UPT8 AL592295.2-201ENST00000612578 206 ntBASIC8□□□□□ -1.13
ZC3H4Q9UPT8 AL450226.2-201ENST00000622913 439 ntBASIC8□□□□□ -1.13
ZC3H4Q9UPT8 AC027575.3-201ENST00000583058 2747 ntBASIC8□□□□□ -1.13
ZC3H4Q9UPT8 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC8□□□□□ -1.13
ZC3H4Q9UPT8 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 MTND5P23-201ENST00000430812 1655 ntBASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AC062029.1-202ENST00000606164 3651 ntBASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 MTCO3P40-201ENST00000392516 676 ntBASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 MIR1178-201ENST00000408396 91 ntBASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 RN7SKP296-201ENST00000411185 341 ntBASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 RN7SKP293-201ENST00000411389 296 ntBASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AC073464.1-201ENST00000429823 534 ntBASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 MTND1P18-201ENST00000448191 573 ntBASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AL033528.1-201ENST00000453780 140 ntBASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 RPL12P31-201ENST00000478433 450 ntBASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 RN7SL705P-201ENST00000481678 294 ntBASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AL136038.1-201ENST00000497246 351 ntBASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 SMARCE1P3-201ENST00000553649 1231 ntBASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AL442663.2-201ENST00000554385 511 ntBASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AP001004.1-201ENST00000582468 324 ntBASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AC008752.3-201ENST00000588113 712 ntBASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AC011453.2-201ENST00000603737 729 ntBASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AC019193.2-201ENST00000610012 634 ntBASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AL352984.2-201ENST00000611153 546 ntBASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AC131902.3-201ENST00000611767 581 ntBASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AL359535.1-201ENST00000612100 1087 ntBASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 EEF1A1P14-201ENST00000421195 1376 ntBASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 MTCO1P6-201ENST00000481192 1384 ntBASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
ZC3H4Q9UPT8 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms