Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 RPL5P5-201ENST00000392009 893 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 RPL5P9-201ENST00000448118 886 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AL022319.1-201ENST00000458183 1167 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AC073137.1-201ENST00000605636 634 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 MIR6500-201ENST00000622700 86 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AL391261.1-201ENST00000555712 1479 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AC025574.1-201ENST00000554784 1653 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AP000542.3-201ENST00000623391 6114 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AC016588.2-201ENST00000632484 3021 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 Y_RNA.295-201ENST00000364918 102 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AC008065.1-201ENST00000428525 348 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 MAPRE1P3-201ENST00000435438 796 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 TRBV5-2-201ENST00000489095 273 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AC002525.1-201ENST00000624392 1622 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AC068870.3-201ENST00000625077 2536 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 RN7SKP57-201ENST00000517248 293 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 MAPK10-270ENST00000641102 3538 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 VN2R3P-201ENST00000422626 1412 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AC140479.3-201ENST00000418944 1126 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 RPS4XP10-201ENST00000465034 731 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 RN7SL558P-201ENST00000497468 299 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 OR4A40P-201ENST00000533878 948 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 BNIP3P8-201ENST00000597863 560 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 uc_338.13-201ENST00000618243 179 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AC027348.2-201ENST00000624375 642 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 EIF3EP2-201ENST00000423042 1814 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 WNK1-204ENST00000530271 11804 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AL353763.1-201ENST00000624467 1628 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AL672296.1-201ENST00000427780 2158 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 ATP5HP3-201ENST00000396994 486 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AC245052.5-201ENST00000416320 649 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 AC108738.1-201ENST00000603703 237 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 MIR8058-201ENST00000615737 89 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 MAPK10-323ENST00000641493 3207 ntBASIC1.87□□□□□ -2.11
MACF1Q9UPN3 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
MACF1Q9UPN3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms