Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CNTN3Q9P232 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
CNTN3Q9P232 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CNTN3Q9P232 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CNTN3Q9P232 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
CNTN3Q9P232 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
CNTN3Q9P232 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
CNTN3Q9P232 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.97□□□□□ -1.29
CNTN3Q9P232 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
CNTN3Q9P232 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.97□□□□□ -1.29
CNTN3Q9P232 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CNTN3Q9P232 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CNTN3Q9P232 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
CNTN3Q9P232 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.97□□□□□ -1.29
CNTN3Q9P232 AC008033.1-201ENST00000216407 1162 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CNTN3Q9P232 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CNTN3Q9P232 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.97□□□□□ -1.29
CNTN3Q9P232 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CNTN3Q9P232 RNA5SP188-201ENST00000362916 129 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 RNU5D-1-201ENST00000363299 116 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
CNTN3Q9P232 XGY1-201ENST00000381172 446 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.97□□□□□ -1.29
CNTN3Q9P232 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.97□□□□□ -1.29
CNTN3Q9P232 SNORA11C-201ENST00000408532 129 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 RNA5SP498-201ENST00000411342 120 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.97□□□□□ -1.29
CNTN3Q9P232 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC6.97□□□□□ -1.29
CNTN3Q9P232 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC6.97□□□□□ -1.29
CNTN3Q9P232 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC6.97□□□□□ -1.29
CNTN3Q9P232 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC6.97□□□□□ -1.29
CNTN3Q9P232 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.97□□□□□ -1.29
CNTN3Q9P232 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.97□□□□□ -1.29
CNTN3Q9P232 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.97□□□□□ -1.29
CNTN3Q9P232 EEF1B2P3-201ENST00000447718 678 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 RPL7P31-201ENST00000450192 724 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 BX248409.1-201ENST00000455497 255 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 RN7SL552P-201ENST00000462094 276 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 AC146507.1-201ENST00000468335 354 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.97□□□□□ -1.29
CNTN3Q9P232 AC092989.1-201ENST00000481235 277 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 RN7SL362P-201ENST00000494228 267 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 SNORA58-201ENST00000505219 137 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 MAST4-IT1-201ENST00000514241 658 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC6.97□□□□□ -1.29
CNTN3Q9P232 AP002812.4-201ENST00000532139 286 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC6.97□□□□□ -1.29
CNTN3Q9P232 PSMB7P1-201ENST00000556349 514 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CNTN3Q9P232 UBE2FP2-201ENST00000566646 462 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC6.97□□□□□ -1.29
CNTN3Q9P232 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 AL390208.1-201ENST00000605885 644 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 AC128687.2-201ENST00000609657 566 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 Y_RNA.804-201ENST00000615262 101 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 AC104260.1-201ENST00000616660 539 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.97□□□□□ -1.29
CNTN3Q9P232 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
CNTN3Q9P232 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CNTN3Q9P232 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
CNTN3Q9P232 AC011455.2-201ENST00000599320 3336 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 CASC19-246ENST00000641625 1606 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CNTN3Q9P232 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CNTN3Q9P232 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CNTN3Q9P232 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CNTN3Q9P232 TMCC1P1-201ENST00000518897 1980 ntBASIC6.97□□□□□ -1.29
CNTN3Q9P232 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CNTN3Q9P232 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CNTN3Q9P232 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.96□□□□□ -1.29
CNTN3Q9P232 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
CNTN3Q9P232 MTND4P12-201ENST00000498999 1377 ntBASIC6.96□□□□□ -1.29
CNTN3Q9P232 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
CNTN3Q9P232 AC006213.6-201ENST00000623722 4179 ntBASIC6.96□□□□□ -1.29
CNTN3Q9P232 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.96□□□□□ -1.29
CNTN3Q9P232 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CNTN3Q9P232 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.29
CNTN3Q9P232 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CNTN3Q9P232 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CNTN3Q9P232 RNA5SP232-201ENST00000364144 119 ntBASIC6.96□□□□□ -1.3
CNTN3Q9P232 Y_RNA.450-201ENST00000384198 113 ntBASIC6.96□□□□□ -1.3
CNTN3Q9P232 AL161909.1-201ENST00000397390 712 ntBASIC6.96□□□□□ -1.3
CNTN3Q9P232 AL590002.1-201ENST00000406554 418 ntBASIC6.96□□□□□ -1.3
CNTN3Q9P232 MIR1275-201ENST00000408770 80 ntBASIC6.96□□□□□ -1.3
CNTN3Q9P232 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CNTN3Q9P232 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.96□□□□□ -1.3
CNTN3Q9P232 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.96□□□□□ -1.3
CNTN3Q9P232 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.96□□□□□ -1.3
CNTN3Q9P232 AL139413.1-201ENST00000421309 217 ntBASIC6.96□□□□□ -1.3
CNTN3Q9P232 OSTCP4-201ENST00000424397 449 ntBASIC6.96□□□□□ -1.3
CNTN3Q9P232 AC233728.2-201ENST00000425348 757 ntBASIC6.96□□□□□ -1.3
CNTN3Q9P232 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CNTN3Q9P232 AL009174.1-201ENST00000426577 416 ntBASIC6.96□□□□□ -1.3
CNTN3Q9P232 TRIM60P3Y-201ENST00000432201 673 ntBASIC6.96□□□□□ -1.3
CNTN3Q9P232 GAPDHP59-201ENST00000435908 267 ntBASIC6.96□□□□□ -1.3
CNTN3Q9P232 PPIAP17-201ENST00000438507 471 ntBASIC6.96□□□□□ -1.3
CNTN3Q9P232 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.96□□□□□ -1.3
CNTN3Q9P232 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms