Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 AC006453.5-201ENST00000636451 619 ntBASIC4.74□□□□□ -1.65
NDE1Q9NXR1 AC087190.4-201ENST00000574616 8334 ntBASIC4.74□□□□□ -1.65
NDE1Q9NXR1 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NDE1Q9NXR1 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 OR6K3-202ENST00000368146 996 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 RNA5SP339-201ENST00000390987 122 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AL021331.1-201ENST00000402817 582 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AL121834.1-202ENST00000404494 277 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AL512504.1-201ENST00000415494 778 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AC066692.1-201ENST00000421721 457 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 EI24P4-201ENST00000423683 1078 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AL354714.3-201ENST00000447284 493 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AC104651.2-201ENST00000447549 528 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 NPM1P39-201ENST00000449818 867 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AL645937.3-201ENST00000453647 936 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 CTSLP6-201ENST00000458273 1002 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 EIF1P7-201ENST00000487533 337 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 PFN1P8-201ENST00000497012 543 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 RPS4XP20-201ENST00000505751 772 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 UGT2A3P7-201ENST00000510485 734 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AC011853.1-201ENST00000518911 454 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AC012339.2-201ENST00000523996 453 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 TRIM77BP-201ENST00000524985 1119 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 MIR4675-201ENST00000577898 77 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 COX6CP4-201ENST00000605798 228 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 MIR6071-201ENST00000616741 78 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 EOGT-210ENST00000615922 1931 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 MTND5P23-201ENST00000430812 1655 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 CUL4AP1-201ENST00000514750 1863 ntBASIC4.73□□□□□ -1.65
NDE1Q9NXR1 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.73□□□□□ -1.65
NDE1Q9NXR1 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 MIR921-201ENST00000401133 56 ntBASIC4.72□□□□□ -1.65
NDE1Q9NXR1 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 VN1R37P-201ENST00000419096 748 ntBASIC4.72□□□□□ -1.65
NDE1Q9NXR1 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 FAM96AP1-201ENST00000430879 482 ntBASIC4.72□□□□□ -1.65
NDE1Q9NXR1 RPL17P35-201ENST00000432217 549 ntBASIC4.72□□□□□ -1.65
NDE1Q9NXR1 AC002504.1-201ENST00000438281 691 ntBASIC4.72□□□□□ -1.65
NDE1Q9NXR1 TDGF1P1-201ENST00000445734 527 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms