Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 RNU5A-4P-201ENST00000516588 111 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 MTCO3P15-201ENST00000526563 574 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 OR4A2P-201ENST00000527276 913 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AC027544.3-201ENST00000535082 757 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 RN7SL753P-201ENST00000581238 290 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AC125494.3-201ENST00000602759 455 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 Z99497.2-201ENST00000603634 310 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 MTND3P19-201ENST00000603825 345 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AL162574.1-201ENST00000615702 950 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 STMN1P1-201ENST00000617809 440 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AC024595.1-201ENST00000623088 387 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 MIR3974-201ENST00000637126 96 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 MIR1322-201ENST00000638013 71 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AC114786.1-201ENST00000512892 1415 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AC025470.1-201ENST00000510053 2032 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AC018809.2-201ENST00000602436 3823 ntBASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CTHRC1Q96CG8 AL121950.1-201ENST00000624993 2077 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 Y_RNA.169-201ENST00000363745 96 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 RNU6-353P-201ENST00000364266 108 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 RNU6-413P-201ENST00000384115 107 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 MIR525-201ENST00000384978 85 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 RN7SKP286-201ENST00000410894 299 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 RN7SKP293-201ENST00000411389 296 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 RPF2P1-201ENST00000424137 906 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 C1DP1-201ENST00000426049 402 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 MTCO1P52-201ENST00000433928 531 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 RPL36AP39-201ENST00000445859 318 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 NPM1P13-201ENST00000452663 865 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 VDAC2P4-201ENST00000452925 711 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 MRPL35P4-201ENST00000453682 566 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 RNU7-140P-201ENST00000459546 60 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 RN7SL174P-201ENST00000475578 289 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 AC111193.1-201ENST00000504097 155 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 AC113347.3-201ENST00000509113 148 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 AC106872.4-201ENST00000510050 523 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 SNORA70.11-201ENST00000515987 138 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 SNORA70.13-201ENST00000516116 138 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 snoZ278.1-201ENST00000517059 112 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 DUXAP6-201ENST00000553858 601 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms