Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 AC087241.2-201ENST00000535801 324 ntBASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 MT1CP-201ENST00000567054 174 ntBASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 SUMO2P14-201ENST00000604488 293 ntBASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 AP000654.2-201ENST00000605633 586 ntBASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 AP005329.3-201ENST00000609924 686 ntBASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 AC093913.1-201ENST00000614178 329 ntBASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 uc_338.29-201ENST00000615099 168 ntBASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 AC090510.2-201ENST00000617465 629 ntBASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 ATM-228ENST00000639240 498 ntTSL 5 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 FGG-201ENST00000336098 1659 ntTSL 2 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 DCAF13P3-201ENST00000561147 1334 ntBASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 AL096816.1-201ENST00000623300 2920 ntBASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 SAMMSON-222ENST00000641901 2727 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 Y_RNA.176-201ENST00000363815 109 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 Y_RNA.395-201ENST00000383945 109 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 RNU6-1103P-201ENST00000384150 107 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 RNU6-985P-201ENST00000410182 104 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 RPL5P25-201ENST00000441148 775 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 GAPDHP37-201ENST00000442317 968 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 TIMM8BP2-201ENST00000445940 251 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 EEF1B2P3-201ENST00000447718 678 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 AKR1D1P1-201ENST00000457236 936 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 AC099340.1-201ENST00000475247 599 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 RNU6-559P-201ENST00000516151 98 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 Vault.2-201ENST00000516519 98 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 Y_RNA.718-201ENST00000517110 102 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 TPM3P3-201ENST00000521343 354 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 PHBP17-201ENST00000528576 541 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 SNRPGP18-201ENST00000553000 214 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 RPL29P33-201ENST00000587474 316 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 AC073539.2-201ENST00000597113 165 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 AP001330.4-201ENST00000604350 154 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 MIR6806-201ENST00000622141 64 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 AC089999.3-201ENST00000622440 577 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 AC099494.2-201ENST00000623371 978 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 AC079597.1-201ENST00000624306 508 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 SNX18P12-201ENST00000624821 759 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 DLEU2L-201ENST00000371086 3555 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 AL512329.1-201ENST00000404600 1592 ntBASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS3Q8IXF0 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS3Q8IXF0 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms