Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RPS7P15-201ENST00000415804 584 ntBASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 MTCO1P54-201ENST00000430139 712 ntBASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 HMGB1P45-201ENST00000435986 653 ntBASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 MRPS21P3-201ENST00000436696 262 ntBASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 MRPL50P4-201ENST00000446432 475 ntBASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 snoU109.1-201ENST00000459339 135 ntBASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 H3F3AP5-201ENST00000475267 429 ntBASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 AP005202.1-201ENST00000489915 867 ntBASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 MTND6P2-201ENST00000512226 524 ntBASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 AC026412.2-201ENST00000512270 1075 ntBASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 RNU6-1225P-201ENST00000516336 65 ntBASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 RBMS2P1-201ENST00000525031 1226 ntBASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 AC130366.1-201ENST00000526505 1192 ntBASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 AC087276.1-201ENST00000529659 480 ntBASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 NDUFA3P2-201ENST00000531434 232 ntBASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 AC093249.1-201ENST00000567049 203 ntBASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 AC019322.1-201ENST00000571869 389 ntBASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 AC022916.3-201ENST00000592961 742 ntBASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 BMS1P7-201ENST00000602440 1052 ntBASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 AL022238.3-201ENST00000609279 443 ntBASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 C2orf27A-204ENST00000623058 969 ntBASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 TEX41-265ENST00000627785 704 ntTSL 5 BASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 AC134503.1-201ENST00000633048 54 ntBASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
FOXR1Q6PIV2 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
FOXR1Q6PIV2 ATP8A2P2-201ENST00000437678 1568 ntBASIC7.15□□□□□ -1.27
FOXR1Q6PIV2 UGT2B26P-201ENST00000508672 1613 ntBASIC7.15□□□□□ -1.27
FOXR1Q6PIV2 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.15□□□□□ -1.27
FOXR1Q6PIV2 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.27
FOXR1Q6PIV2 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
FOXR1Q6PIV2 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.15□□□□□ -1.27
FOXR1Q6PIV2 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
FOXR1Q6PIV2 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
FOXR1Q6PIV2 AC132825.1-201ENST00000463573 2247 ntBASIC7.15□□□□□ -1.27
FOXR1Q6PIV2 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 RNU6-1085P-201ENST00000363576 107 ntBASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 AC109780.2-201ENST00000413467 845 ntBASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 LINC01347-201ENST00000417964 355 ntBASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 OR1AA1P-201ENST00000419597 916 ntBASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 AL353678.1-201ENST00000422735 741 ntBASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 RPSAP32-201ENST00000432681 526 ntBASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 RPL7P11-201ENST00000437586 658 ntBASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 AL034399.1-201ENST00000451535 380 ntBASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 RN7SL267P-201ENST00000485107 261 ntBASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 RNU6-1281P-201ENST00000516223 105 ntBASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 RN7SKP31-201ENST00000516354 278 ntBASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 ATP5F1P7-201ENST00000567330 760 ntBASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 AC091932.1-201ENST00000569381 427 ntBASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 AP001004.1-201ENST00000582468 324 ntBASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 RPL12P25-202ENST00000598100 674 ntBASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 AC243960.4-201ENST00000600532 288 ntBASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 AC007687.1-201ENST00000602704 304 ntBASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 RMST_3.1-201ENST00000611651 109 ntBASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 AL031777.2-201ENST00000611953 196 ntBASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 AC006453.3-201ENST00000635891 377 ntBASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
FOXR1Q6PIV2 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms