Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.78□□□□□ -1.64
SEC61A1P61619 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SEC61A1P61619 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SEC61A1P61619 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SEC61A1P61619 RNA5SP46-201ENST00000362370 120 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 U3.25-201ENST00000391209 220 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 RN7SKP229-201ENST00000410465 302 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 SDHDP6-201ENST00000414693 480 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.78□□□□□ -1.64
SEC61A1P61619 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.78□□□□□ -1.64
SEC61A1P61619 AL160175.1-201ENST00000428124 247 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 TMEM183AP1-205ENST00000432739 290 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 AC002504.1-201ENST00000438281 691 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 AL157827.1-201ENST00000447622 132 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.78□□□□□ -1.64
SEC61A1P61619 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.78□□□□□ -1.64
SEC61A1P61619 AC092155.2-201ENST00000454675 477 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 AC021660.1-201ENST00000465006 554 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 NDUFA5P9-201ENST00000472609 340 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SEC61A1P61619 RPL21P47-201ENST00000483696 477 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 RPS12P31-201ENST00000491419 398 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 MYL12BP2-201ENST00000503948 512 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.78□□□□□ -1.64
SEC61A1P61619 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.78□□□□□ -1.64
SEC61A1P61619 AC138866.2-201ENST00000508650 584 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.78□□□□□ -1.64
SEC61A1P61619 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.78□□□□□ -1.64
SEC61A1P61619 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.78□□□□□ -1.64
SEC61A1P61619 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.78□□□□□ -1.64
SEC61A1P61619 RNU6-615P-201ENST00000516065 106 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 RNU6-1308P-201ENST00000516817 103 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 AC021678.3-201ENST00000517893 476 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SEC61A1P61619 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.78□□□□□ -1.64
SEC61A1P61619 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.78□□□□□ -1.64
SEC61A1P61619 MRPS16P1-201ENST00000523462 412 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SEC61A1P61619 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SEC61A1P61619 AC022404.1-201ENST00000555320 273 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.78□□□□□ -1.64
SEC61A1P61619 AC096996.1-201ENST00000563813 325 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 MIR4505-201ENST00000582238 73 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 AP005262.1-201ENST00000582646 997 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 MIR4260-201ENST00000583107 67 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 AC013444.2-201ENST00000603317 787 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.78□□□□□ -1.64
SEC61A1P61619 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.78□□□□□ -1.64
SEC61A1P61619 AC100847.1-201ENST00000611316 481 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.78□□□□□ -1.64
SEC61A1P61619 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.78□□□□□ -1.64
SEC61A1P61619 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.78□□□□□ -1.64
SEC61A1P61619 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.78□□□□□ -1.64
SEC61A1P61619 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.78□□□□□ -1.64
SEC61A1P61619 AL049767.1-202ENST00000637826 242 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SEC61A1P61619 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SEC61A1P61619 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SEC61A1P61619 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.78□□□□□ -1.64
SEC61A1P61619 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SEC61A1P61619 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SEC61A1P61619 AL731532.2-201ENST00000623542 1953 ntBASIC4.78□□□□□ -1.64
SEC61A1P61619 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SEC61A1P61619 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SEC61A1P61619 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.78□□□□□ -1.64
SEC61A1P61619 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SEC61A1P61619 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SEC61A1P61619 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SEC61A1P61619 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SEC61A1P61619 AL355578.1-201ENST00000607405 1328 ntBASIC4.77□□□□□ -1.65
SEC61A1P61619 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
SEC61A1P61619 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SEC61A1P61619 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.77□□□□□ -1.65
SEC61A1P61619 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SEC61A1P61619 ZNF90P1-201ENST00000480493 1951 ntBASIC4.77□□□□□ -1.65
SEC61A1P61619 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SEC61A1P61619 AL121886.1-201ENST00000358609 435 ntBASIC4.77□□□□□ -1.65
SEC61A1P61619 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.77□□□□□ -1.65
SEC61A1P61619 SNORD116-2-201ENST00000384274 95 ntBASIC4.77□□□□□ -1.65
SEC61A1P61619 SNORD116-6-201ENST00000384711 96 ntBASIC4.77□□□□□ -1.65
SEC61A1P61619 ATP5HP3-201ENST00000396994 486 ntBASIC4.77□□□□□ -1.65
SEC61A1P61619 EI24P3-201ENST00000399046 1062 ntBASIC4.77□□□□□ -1.65
SEC61A1P61619 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.77□□□□□ -1.65
SEC61A1P61619 UBE2V1P9-201ENST00000414760 368 ntBASIC4.77□□□□□ -1.65
SEC61A1P61619 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.77□□□□□ -1.65
SEC61A1P61619 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.77□□□□□ -1.65
SEC61A1P61619 AC093084.1-201ENST00000424233 687 ntBASIC4.77□□□□□ -1.65
SEC61A1P61619 AL022331.1-201ENST00000429025 477 ntBASIC4.77□□□□□ -1.65
SEC61A1P61619 ARF4P4-201ENST00000439608 520 ntBASIC4.77□□□□□ -1.65
SEC61A1P61619 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.77□□□□□ -1.65
SEC61A1P61619 AC073909.1-201ENST00000447112 999 ntBASIC4.77□□□□□ -1.65
SEC61A1P61619 Z99714.1-201ENST00000450463 807 ntBASIC4.77□□□□□ -1.65
SEC61A1P61619 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.77□□□□□ -1.65
SEC61A1P61619 AC245028.2-201ENST00000458673 253 ntBASIC4.77□□□□□ -1.65
SEC61A1P61619 RN7SL188P-201ENST00000469842 285 ntBASIC4.77□□□□□ -1.65
SEC61A1P61619 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.77□□□□□ -1.65
SEC61A1P61619 AC087672.1-201ENST00000479876 766 ntBASIC4.77□□□□□ -1.65
SEC61A1P61619 AC116562.1-201ENST00000485355 781 ntBASIC4.77□□□□□ -1.65
SEC61A1P61619 AC107398.1-201ENST00000486904 505 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms