Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 RPL23AP26-201ENST00000412728 464 ntBASIC3.49□□□□□ -1.85
CKS1BP61024 SDHDP6-201ENST00000414693 480 ntBASIC3.49□□□□□ -1.85
CKS1BP61024 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.49□□□□□ -1.85
CKS1BP61024 TNPO1P1-201ENST00000423641 1138 ntBASIC3.49□□□□□ -1.85
CKS1BP61024 SRSF1P1-201ENST00000424058 520 ntBASIC3.49□□□□□ -1.85
CKS1BP61024 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC3.49□□□□□ -1.85
CKS1BP61024 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.49□□□□□ -1.85
CKS1BP61024 AC110602.1-201ENST00000437414 318 ntBASIC3.49□□□□□ -1.85
CKS1BP61024 AC092013.1-201ENST00000438795 332 ntBASIC3.49□□□□□ -1.85
CKS1BP61024 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC3.49□□□□□ -1.85
CKS1BP61024 EEF1B2P6-201ENST00000445713 673 ntBASIC3.49□□□□□ -1.85
CKS1BP61024 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.49□□□□□ -1.85
CKS1BP61024 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.49□□□□□ -1.85
CKS1BP61024 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC3.49□□□□□ -1.85
CKS1BP61024 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC3.49□□□□□ -1.85
CKS1BP61024 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC3.49□□□□□ -1.85
CKS1BP61024 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.49□□□□□ -1.85
CKS1BP61024 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.49□□□□□ -1.85
CKS1BP61024 HMGB1P40-201ENST00000525121 540 ntBASIC3.49□□□□□ -1.85
CKS1BP61024 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC3.49□□□□□ -1.85
CKS1BP61024 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.49□□□□□ -1.85
CKS1BP61024 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
CKS1BP61024 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CKS1BP61024 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC3.49□□□□□ -1.85
CKS1BP61024 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CKS1BP61024 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC3.49□□□□□ -1.85
CKS1BP61024 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.49□□□□□ -1.85
CKS1BP61024 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.49□□□□□ -1.85
CKS1BP61024 AL138895.2-201ENST00000603019 178 ntBASIC3.49□□□□□ -1.85
CKS1BP61024 AC083899.3-201ENST00000603413 594 ntBASIC3.49□□□□□ -1.85
CKS1BP61024 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.49□□□□□ -1.85
CKS1BP61024 AL162431.4-201ENST00000604674 411 ntBASIC3.49□□□□□ -1.85
CKS1BP61024 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC3.49□□□□□ -1.85
CKS1BP61024 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.49□□□□□ -1.85
CKS1BP61024 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.49□□□□□ -1.85
CKS1BP61024 MIR4727-201ENST00000622232 55 ntBASIC3.49□□□□□ -1.85
CKS1BP61024 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.49□□□□□ -1.85
CKS1BP61024 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC3.49□□□□□ -1.85
CKS1BP61024 OR52B5P-202ENST00000641118 1110 ntBASIC3.49□□□□□ -1.85
CKS1BP61024 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CKS1BP61024 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CKS1BP61024 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CKS1BP61024 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CKS1BP61024 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.49□□□□□ -1.85
CKS1BP61024 AC010300.1-201ENST00000600671 5134 ntBASIC3.49□□□□□ -1.85
CKS1BP61024 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CKS1BP61024 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CKS1BP61024 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CKS1BP61024 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CKS1BP61024 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CKS1BP61024 AC006210.2-201ENST00000367074 1545 ntBASIC3.49□□□□□ -1.85
CKS1BP61024 AC016588.2-201ENST00000632484 3021 ntBASIC3.49□□□□□ -1.85
CKS1BP61024 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CKS1BP61024 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CKS1BP61024 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.48□□□□□ -1.85
CKS1BP61024 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CKS1BP61024 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.48□□□□□ -1.85
CKS1BP61024 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CKS1BP61024 AC027287.1-201ENST00000553115 1453 ntBASIC3.48□□□□□ -1.85
CKS1BP61024 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CKS1BP61024 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CKS1BP61024 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CKS1BP61024 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CKS1BP61024 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CKS1BP61024 OR52B3P-201ENST00000314715 928 ntBASIC3.48□□□□□ -1.85
CKS1BP61024 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CKS1BP61024 SNORD74.4-201ENST00000364129 80 ntBASIC3.48□□□□□ -1.85
CKS1BP61024 RN7SKP171-201ENST00000364417 303 ntBASIC3.48□□□□□ -1.85
CKS1BP61024 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CKS1BP61024 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CKS1BP61024 MTND4LP21-201ENST00000415303 295 ntBASIC3.48□□□□□ -1.85
CKS1BP61024 EIF4A1P7-201ENST00000421800 1220 ntBASIC3.48□□□□□ -1.85
CKS1BP61024 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.48□□□□□ -1.85
CKS1BP61024 ATP5A1P8-201ENST00000423669 1291 ntBASIC3.48□□□□□ -1.85
CKS1BP61024 AL662874.1-201ENST00000426065 230 ntBASIC3.48□□□□□ -1.85
CKS1BP61024 RPL12P28-201ENST00000430852 489 ntBASIC3.48□□□□□ -1.85
CKS1BP61024 RPS29P10-201ENST00000439197 166 ntBASIC3.48□□□□□ -1.85
CKS1BP61024 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC3.48□□□□□ -1.85
CKS1BP61024 HLA-DPA3-207ENST00000454398 229 ntBASIC3.48□□□□□ -1.85
CKS1BP61024 AC011476.1-201ENST00000466725 307 ntBASIC3.48□□□□□ -1.85
CKS1BP61024 OR2A1-AS1-202ENST00000467944 422 ntBASIC3.48□□□□□ -1.85
CKS1BP61024 AC087385.1-201ENST00000475062 312 ntBASIC3.48□□□□□ -1.85
CKS1BP61024 RN7SL41P-201ENST00000476144 297 ntBASIC3.48□□□□□ -1.85
CKS1BP61024 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC3.48□□□□□ -1.85
CKS1BP61024 FGB-207ENST00000509493 1164 ntTSL 5 BASIC3.48□□□□□ -1.85
CKS1BP61024 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.48□□□□□ -1.85
CKS1BP61024 AC006427.1-201ENST00000514359 712 ntBASIC3.48□□□□□ -1.85
CKS1BP61024 RNA5SP309-201ENST00000516670 106 ntBASIC3.48□□□□□ -1.85
CKS1BP61024 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC3.48□□□□□ -1.85
CKS1BP61024 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC3.48□□□□□ -1.85
CKS1BP61024 YWHABP2-201ENST00000540201 713 ntBASIC3.48□□□□□ -1.85
CKS1BP61024 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CKS1BP61024 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC3.48□□□□□ -1.85
CKS1BP61024 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.48□□□□□ -1.85
CKS1BP61024 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.48□□□□□ -1.85
CKS1BP61024 AL109741.3-201ENST00000561748 592 ntBASIC3.48□□□□□ -1.85
CKS1BP61024 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC3.48□□□□□ -1.85
CKS1BP61024 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC3.48□□□□□ -1.85
CKS1BP61024 MIR4716-201ENST00000579628 84 ntBASIC3.48□□□□□ -1.85
CKS1BP61024 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms