Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF144AP50876 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF144AP50876 AC068870.3-201ENST00000625077 2536 ntBASIC6.83□□□□□ -1.32
RNF144AP50876 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.83□□□□□ -1.32
RNF144AP50876 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
RNF144AP50876 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF144AP50876 RIOK3P1-201ENST00000418778 1528 ntBASIC6.83□□□□□ -1.32
RNF144AP50876 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF144AP50876 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF144AP50876 Y_RNA.31-201ENST00000362574 102 ntBASIC6.83□□□□□ -1.32
RNF144AP50876 RN7SKP63-201ENST00000363187 301 ntBASIC6.83□□□□□ -1.32
RNF144AP50876 OR52E6-202ENST00000379946 954 ntBASIC6.83□□□□□ -1.32
RNF144AP50876 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
RNF144AP50876 RN7SKP131-201ENST00000410698 301 ntBASIC6.83□□□□□ -1.32
RNF144AP50876 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.83□□□□□ -1.32
RNF144AP50876 AC017104.2-201ENST00000417000 321 ntBASIC6.83□□□□□ -1.32
RNF144AP50876 RPL7P4-203ENST00000430239 730 ntBASIC6.83□□□□□ -1.32
RNF144AP50876 TRGVB-201ENST00000453257 471 ntBASIC6.83□□□□□ -1.32
RNF144AP50876 RN7SL213P-201ENST00000463482 317 ntBASIC6.83□□□□□ -1.32
RNF144AP50876 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC6.83□□□□□ -1.32
RNF144AP50876 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.83□□□□□ -1.32
RNF144AP50876 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC6.83□□□□□ -1.32
RNF144AP50876 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC6.83□□□□□ -1.32
RNF144AP50876 AC095059.2-201ENST00000510601 933 ntBASIC6.83□□□□□ -1.32
RNF144AP50876 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC6.83□□□□□ -1.32
RNF144AP50876 GTF2IP11-201ENST00000526931 420 ntBASIC6.83□□□□□ -1.32
RNF144AP50876 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC6.83□□□□□ -1.32
RNF144AP50876 MYL6-211ENST00000548580 528 ntTSL 2 BASIC6.83□□□□□ -1.32
RNF144AP50876 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC6.83□□□□□ -1.32
RNF144AP50876 ULK4P3-201ENST00000563895 440 ntBASIC6.83□□□□□ -1.32
RNF144AP50876 SS18L2P2-201ENST00000583960 235 ntBASIC6.83□□□□□ -1.32
RNF144AP50876 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC6.83□□□□□ -1.32
RNF144AP50876 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC6.83□□□□□ -1.32
RNF144AP50876 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC6.83□□□□□ -1.32
RNF144AP50876 AL049829.3-202ENST00000604278 711 ntBASIC6.83□□□□□ -1.32
RNF144AP50876 AC021646.1-201ENST00000605469 484 ntBASIC6.83□□□□□ -1.32
RNF144AP50876 SNORA43.5-201ENST00000631270 138 ntBASIC6.83□□□□□ -1.32
RNF144AP50876 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC6.83□□□□□ -1.32
RNF144AP50876 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF144AP50876 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
RNF144AP50876 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF144AP50876 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
RNF144AP50876 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
RNF144AP50876 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF144AP50876 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.83□□□□□ -1.32
RNF144AP50876 AC046144.1-201ENST00000478559 1853 ntBASIC6.83□□□□□ -1.32
RNF144AP50876 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF144AP50876 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
RNF144AP50876 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF144AP50876 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.82□□□□□ -1.32
RNF144AP50876 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF144AP50876 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RNF144AP50876 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RNF144AP50876 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RNF144AP50876 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF144AP50876 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.82□□□□□ -1.32
RNF144AP50876 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC6.82□□□□□ -1.32
RNF144AP50876 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RNF144AP50876 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF144AP50876 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RNF144AP50876 FOLH1B-202ENST00000529567 2145 ntBASIC6.82□□□□□ -1.32
RNF144AP50876 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
RNF144AP50876 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RNF144AP50876 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF144AP50876 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.82□□□□□ -1.32
RNF144AP50876 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
RNF144AP50876 SNRPEP3-201ENST00000338402 276 ntBASIC6.82□□□□□ -1.32
RNF144AP50876 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.82□□□□□ -1.32
RNF144AP50876 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
RNF144AP50876 Y_RNA.395-201ENST00000383945 109 ntBASIC6.82□□□□□ -1.32
RNF144AP50876 SNORD116-29-201ENST00000384516 83 ntBASIC6.82□□□□□ -1.32
RNF144AP50876 MIR506-201ENST00000384998 124 ntBASIC6.82□□□□□ -1.32
RNF144AP50876 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RNF144AP50876 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
RNF144AP50876 RN7SKP279-201ENST00000411383 298 ntBASIC6.82□□□□□ -1.32
RNF144AP50876 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC6.82□□□□□ -1.32
RNF144AP50876 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.82□□□□□ -1.32
RNF144AP50876 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.82□□□□□ -1.32
RNF144AP50876 RPS7P14-201ENST00000426405 583 ntBASIC6.82□□□□□ -1.32
RNF144AP50876 SRIP2-201ENST00000428470 166 ntBASIC6.82□□□□□ -1.32
RNF144AP50876 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.82□□□□□ -1.32
RNF144AP50876 AC000362.1-201ENST00000433725 425 ntBASIC6.82□□□□□ -1.32
RNF144AP50876 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC6.82□□□□□ -1.32
RNF144AP50876 AC012512.1-201ENST00000446594 718 ntBASIC6.82□□□□□ -1.32
RNF144AP50876 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.82□□□□□ -1.32
RNF144AP50876 TCEA1P1-201ENST00000449716 880 ntBASIC6.82□□□□□ -1.32
RNF144AP50876 RPL7P14-201ENST00000449851 741 ntBASIC6.82□□□□□ -1.32
RNF144AP50876 AC117395.2-201ENST00000463122 1128 ntBASIC6.82□□□□□ -1.32
RNF144AP50876 HMGN2P26-201ENST00000463169 339 ntBASIC6.82□□□□□ -1.32
RNF144AP50876 AC117394.1-201ENST00000477323 567 ntBASIC6.82□□□□□ -1.32
RNF144AP50876 RN7SL549P-201ENST00000478997 282 ntBASIC6.82□□□□□ -1.32
RNF144AP50876 RN7SL282P-201ENST00000479676 297 ntBASIC6.82□□□□□ -1.32
RNF144AP50876 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.82□□□□□ -1.32
RNF144AP50876 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF144AP50876 OR7E163P-201ENST00000505943 894 ntBASIC6.82□□□□□ -1.32
RNF144AP50876 PTP4A1P4-201ENST00000512479 322 ntBASIC6.82□□□□□ -1.32
RNF144AP50876 AC006499.2-201ENST00000513470 337 ntBASIC6.82□□□□□ -1.32
RNF144AP50876 AC026801.2-201ENST00000515352 425 ntBASIC6.82□□□□□ -1.32
RNF144AP50876 MTCO2P24-201ENST00000515611 426 ntBASIC6.82□□□□□ -1.32
RNF144AP50876 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms