Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 GLULP6-201ENST00000399502 913 ntBASIC6.26□□□□□ -1.41
COL3A1P02461 AP000580.1-201ENST00000404439 358 ntBASIC6.26□□□□□ -1.41
COL3A1P02461 ELOCP19-201ENST00000411919 318 ntBASIC6.26□□□□□ -1.41
COL3A1P02461 NPM1P36-201ENST00000415681 835 ntBASIC6.26□□□□□ -1.41
COL3A1P02461 RPEP3-201ENST00000425462 676 ntBASIC6.26□□□□□ -1.41
COL3A1P02461 AC092447.3-201ENST00000426027 686 ntBASIC6.26□□□□□ -1.41
COL3A1P02461 RPL23AP1-201ENST00000428990 471 ntBASIC6.26□□□□□ -1.41
COL3A1P02461 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC6.26□□□□□ -1.41
COL3A1P02461 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.26□□□□□ -1.41
COL3A1P02461 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC6.26□□□□□ -1.41
COL3A1P02461 ALG13-211ENST00000473389 693 ntTSL 2 BASIC6.26□□□□□ -1.41
COL3A1P02461 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.26□□□□□ -1.41
COL3A1P02461 AC090686.1-201ENST00000481577 749 ntBASIC6.26□□□□□ -1.41
COL3A1P02461 DEFB109A-201ENST00000482450 265 ntBASIC6.26□□□□□ -1.41
COL3A1P02461 MTND3P6-201ENST00000485242 339 ntBASIC6.26□□□□□ -1.41
COL3A1P02461 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL3A1P02461 AC111000.3-201ENST00000508057 576 ntBASIC6.26□□□□□ -1.41
COL3A1P02461 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.26□□□□□ -1.41
COL3A1P02461 OR4R2P-201ENST00000530815 597 ntBASIC6.26□□□□□ -1.41
COL3A1P02461 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.26□□□□□ -1.41
COL3A1P02461 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC6.26□□□□□ -1.41
COL3A1P02461 AC006116.5-201ENST00000591936 559 ntBASIC6.26□□□□□ -1.41
COL3A1P02461 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.26□□□□□ -1.41
COL3A1P02461 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.26□□□□□ -1.41
COL3A1P02461 AC073137.1-201ENST00000605636 634 ntBASIC6.26□□□□□ -1.41
COL3A1P02461 AL050303.3-201ENST00000613704 284 ntBASIC6.26□□□□□ -1.41
COL3A1P02461 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
COL3A1P02461 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL3A1P02461 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL3A1P02461 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL3A1P02461 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.26□□□□□ -1.41
COL3A1P02461 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.26□□□□□ -1.41
COL3A1P02461 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL3A1P02461 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL3A1P02461 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.25□□□□□ -1.41
COL3A1P02461 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC6.25□□□□□ -1.41
COL3A1P02461 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL3A1P02461 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL3A1P02461 AC005831.1-201ENST00000624384 1697 ntBASIC6.25□□□□□ -1.41
COL3A1P02461 AL355143.1-201ENST00000407101 841 ntBASIC6.25□□□□□ -1.41
COL3A1P02461 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.25□□□□□ -1.41
COL3A1P02461 RPS27AP7-201ENST00000422792 455 ntBASIC6.25□□□□□ -1.41
COL3A1P02461 MRPS21P2-201ENST00000424704 264 ntBASIC6.25□□□□□ -1.41
COL3A1P02461 AL390879.2-203ENST00000426943 1121 ntBASIC6.25□□□□□ -1.41
COL3A1P02461 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.25□□□□□ -1.41
COL3A1P02461 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC6.25□□□□□ -1.41
COL3A1P02461 CYCSP42-201ENST00000450823 238 ntBASIC6.25□□□□□ -1.41
COL3A1P02461 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.25□□□□□ -1.41
COL3A1P02461 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.25□□□□□ -1.41
COL3A1P02461 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC6.25□□□□□ -1.41
COL3A1P02461 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL3A1P02461 RPL5P12-201ENST00000477071 851 ntBASIC6.25□□□□□ -1.41
COL3A1P02461 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC6.25□□□□□ -1.41
COL3A1P02461 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC6.25□□□□□ -1.41
COL3A1P02461 AC138832.1-201ENST00000522871 556 ntBASIC6.25□□□□□ -1.41
COL3A1P02461 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.25□□□□□ -1.41
COL3A1P02461 VBP1-203ENST00000535916 944 ntTSL 2 BASIC6.25□□□□□ -1.41
COL3A1P02461 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC6.25□□□□□ -1.41
COL3A1P02461 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.25□□□□□ -1.41
COL3A1P02461 AC040904.1-201ENST00000590850 223 ntBASIC6.25□□□□□ -1.41
COL3A1P02461 VN1R87P-201ENST00000596706 487 ntBASIC6.25□□□□□ -1.41
COL3A1P02461 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL3A1P02461 BX322635.1-201ENST00000605804 496 ntBASIC6.25□□□□□ -1.41
COL3A1P02461 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC6.25□□□□□ -1.41
COL3A1P02461 AC090912.3-201ENST00000609775 533 ntBASIC6.25□□□□□ -1.41
COL3A1P02461 AC104763.3-201ENST00000613765 618 ntBASIC6.25□□□□□ -1.41
COL3A1P02461 AC107905.1-201ENST00000616204 426 ntBASIC6.25□□□□□ -1.41
COL3A1P02461 AC015804.1-201ENST00000622935 435 ntBASIC6.25□□□□□ -1.41
COL3A1P02461 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC6.25□□□□□ -1.41
COL3A1P02461 CU459211.1-201ENST00000635667 749 ntBASIC6.25□□□□□ -1.41
COL3A1P02461 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL3A1P02461 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC6.25□□□□□ -1.41
COL3A1P02461 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL3A1P02461 AL136520.1-201ENST00000600311 1322 ntBASIC6.25□□□□□ -1.41
COL3A1P02461 MFSD8-213ENST00000641134 1327 ntBASIC6.25□□□□□ -1.41
COL3A1P02461 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL3A1P02461 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL3A1P02461 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.24□□□□□ -1.41
COL3A1P02461 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.24□□□□□ -1.41
COL3A1P02461 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.24□□□□□ -1.41
COL3A1P02461 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
COL3A1P02461 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL3A1P02461 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL3A1P02461 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC6.24□□□□□ -1.41
COL3A1P02461 ZNF885P-201ENST00000420174 1098 ntBASIC6.24□□□□□ -1.41
COL3A1P02461 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6.24□□□□□ -1.41
COL3A1P02461 AL606517.1-201ENST00000446914 387 ntBASIC6.24□□□□□ -1.41
COL3A1P02461 OR7L1P-201ENST00000456181 380 ntBASIC6.24□□□□□ -1.41
COL3A1P02461 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.24□□□□□ -1.41
COL3A1P02461 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.24□□□□□ -1.41
COL3A1P02461 AC093267.1-201ENST00000489176 961 ntBASIC6.24□□□□□ -1.41
COL3A1P02461 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC6.24□□□□□ -1.41
COL3A1P02461 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC6.24□□□□□ -1.41
COL3A1P02461 AC087888.1-201ENST00000550884 1254 ntBASIC6.24□□□□□ -1.41
COL3A1P02461 MTCYBP28-201ENST00000566728 1132 ntBASIC6.24□□□□□ -1.41
COL3A1P02461 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC6.24□□□□□ -1.41
COL3A1P02461 AP005119.2-201ENST00000579735 1105 ntBASIC6.24□□□□□ -1.41
COL3A1P02461 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.24□□□□□ -1.41
COL3A1P02461 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.24□□□□□ -1.41
COL3A1P02461 AC027449.1-201ENST00000608890 407 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms