Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC008280.2-201ENST00000455473 307 ntBASIC5.45□□□□□ -1.54
HMGB4Q8WW32 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 ATP5LP5-201ENST00000483050 299 ntBASIC5.45□□□□□ -1.54
HMGB4Q8WW32 AC118282.1-201ENST00000506408 765 ntBASIC5.45□□□□□ -1.54
HMGB4Q8WW32 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 RN7SKP253-201ENST00000516424 309 ntBASIC5.45□□□□□ -1.54
HMGB4Q8WW32 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 AP001922.4-201ENST00000526967 290 ntBASIC5.45□□□□□ -1.54
HMGB4Q8WW32 NMNAT1P5-201ENST00000559657 841 ntBASIC5.45□□□□□ -1.54
HMGB4Q8WW32 AC005341.1-201ENST00000571086 708 ntBASIC5.45□□□□□ -1.54
HMGB4Q8WW32 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 AC004656.1-201ENST00000568479 4951 ntBASIC5.45□□□□□ -1.54
HMGB4Q8WW32 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
HMGB4Q8WW32 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 AL121839.2-201ENST00000565058 6943 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 AC083843.2-201ENST00000568248 6253 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 VPS35P1-201ENST00000563400 1518 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 SNORA17.1-201ENST00000362945 126 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 RNU6-452P-201ENST00000384406 107 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 RNU6-185P-201ENST00000384421 107 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 AL109941.1-201ENST00000401925 229 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 RPL7P58-201ENST00000402913 758 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 AC211486.3-201ENST00000412694 621 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 AC093422.3-201ENST00000428506 305 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 RBMY2QP-201ENST00000429799 1147 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 AC006466.1-201ENST00000438721 289 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 DNAJB5P1-201ENST00000454004 806 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 GTF2IP12-201ENST00000456547 356 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 RPL7P6-201ENST00000480903 738 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 SNORA19.3-201ENST00000516165 130 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 AC092490.3-201ENST00000545370 572 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 MIR4789-201ENST00000577469 82 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 AC011840.5-201ENST00000582125 771 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 ZNF849P-201ENST00000594711 1566 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 AC095055.1-201ENST00000603472 1113 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 AL451049.1-201ENST00000608672 497 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 MIR6820-201ENST00000611508 62 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 AC022079.2-201ENST00000619739 566 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 NXF4-202ENST00000416098 1465 ntBASIC5.44□□□□□ -1.54
HMGB4Q8WW32 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.44□□□□□ -1.54
HMGB4Q8WW32 CCT8P1-201ENST00000413611 1657 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 MTCO1P15-201ENST00000529569 1526 ntBASIC5.43□□□□□ -1.54
HMGB4Q8WW32 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGB4Q8WW32 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms