Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 USP9YP9-201ENST00000429406 715 ntBASIC4.83□□□□□ -1.64
AP1S1P61966 AC012512.1-201ENST00000446594 718 ntBASIC4.83□□□□□ -1.64
AP1S1P61966 RPL7L1P1-201ENST00000448259 785 ntBASIC4.83□□□□□ -1.64
AP1S1P61966 RPL21P6-201ENST00000479171 504 ntBASIC4.83□□□□□ -1.64
AP1S1P61966 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
AP1S1P61966 AC138409.2-202ENST00000507274 458 ntBASIC4.83□□□□□ -1.64
AP1S1P61966 RN7SKP276-201ENST00000516242 268 ntBASIC4.83□□□□□ -1.64
AP1S1P61966 SOX5P1-201ENST00000524155 1127 ntBASIC4.83□□□□□ -1.64
AP1S1P61966 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.83□□□□□ -1.64
AP1S1P61966 AC093249.4-201ENST00000564755 259 ntBASIC4.83□□□□□ -1.64
AP1S1P61966 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.83□□□□□ -1.64
AP1S1P61966 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.83□□□□□ -1.64
AP1S1P61966 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.83□□□□□ -1.64
AP1S1P61966 OR8G7P-201ENST00000616658 848 ntBASIC4.83□□□□□ -1.64
AP1S1P61966 AP001642.1-201ENST00000624727 2117 ntBASIC4.83□□□□□ -1.64
AP1S1P61966 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.83□□□□□ -1.64
AP1S1P61966 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
AP1S1P61966 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
AP1S1P61966 AL442639.1-201ENST00000625030 1899 ntBASIC4.83□□□□□ -1.64
AP1S1P61966 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
AP1S1P61966 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.83□□□□□ -1.64
AP1S1P61966 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.83□□□□□ -1.64
AP1S1P61966 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
AP1S1P61966 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.83□□□□□ -1.64
AP1S1P61966 AC025574.1-201ENST00000554784 1653 ntBASIC4.83□□□□□ -1.64
AP1S1P61966 AL359922.3-201ENST00000624779 1670 ntBASIC4.83□□□□□ -1.64
AP1S1P61966 AC063923.1-201ENST00000478982 1619 ntBASIC4.83□□□□□ -1.64
AP1S1P61966 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.82□□□□□ -1.64
AP1S1P61966 AL121950.1-201ENST00000624993 2077 ntBASIC4.82□□□□□ -1.64
AP1S1P61966 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.82□□□□□ -1.64
AP1S1P61966 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.82□□□□□ -1.64
AP1S1P61966 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
AP1S1P61966 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
AP1S1P61966 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
AP1S1P61966 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
AP1S1P61966 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.82□□□□□ -1.64
AP1S1P61966 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
AP1S1P61966 CTSL3P-202ENST00000412179 788 ntBASIC4.82□□□□□ -1.64
AP1S1P61966 GLUD1P9-201ENST00000420997 1173 ntBASIC4.82□□□□□ -1.64
AP1S1P61966 EIF4HP2-201ENST00000424380 563 ntBASIC4.82□□□□□ -1.64
AP1S1P61966 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.82□□□□□ -1.64
AP1S1P61966 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.82□□□□□ -1.64
AP1S1P61966 CYCSP11-201ENST00000436426 315 ntBASIC4.82□□□□□ -1.64
AP1S1P61966 TMX2P1-201ENST00000436507 708 ntBASIC4.82□□□□□ -1.64
AP1S1P61966 AC016831.4-201ENST00000438302 307 ntBASIC4.82□□□□□ -1.64
AP1S1P61966 MRPL48P1-201ENST00000445390 636 ntBASIC4.82□□□□□ -1.64
AP1S1P61966 AL157385.1-201ENST00000446973 268 ntBASIC4.82□□□□□ -1.64
AP1S1P61966 AC011005.3-201ENST00000491624 395 ntBASIC4.82□□□□□ -1.64
AP1S1P61966 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP1S1P61966 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.82□□□□□ -1.64
AP1S1P61966 AC091868.1-201ENST00000508746 304 ntBASIC4.82□□□□□ -1.64
AP1S1P61966 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.82□□□□□ -1.64
AP1S1P61966 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.82□□□□□ -1.64
AP1S1P61966 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.82□□□□□ -1.64
AP1S1P61966 BNIP3P1-201ENST00000547295 580 ntBASIC4.82□□□□□ -1.64
AP1S1P61966 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.82□□□□□ -1.64
AP1S1P61966 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.82□□□□□ -1.64
AP1S1P61966 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.82□□□□□ -1.64
AP1S1P61966 AC008536.1-201ENST00000602872 669 ntBASIC4.82□□□□□ -1.64
AP1S1P61966 AC011815.3-201ENST00000624194 473 ntBASIC4.82□□□□□ -1.64
AP1S1P61966 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.82□□□□□ -1.64
AP1S1P61966 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
AP1S1P61966 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP1S1P61966 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.82□□□□□ -1.64
AP1S1P61966 DHX9P1-201ENST00000436565 3076 ntBASIC4.82□□□□□ -1.64
AP1S1P61966 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
AP1S1P61966 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP1S1P61966 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
AP1S1P61966 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
AP1S1P61966 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
AP1S1P61966 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.81□□□□□ -1.64
AP1S1P61966 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.81□□□□□ -1.64
AP1S1P61966 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S1P61966 AC008549.2-201ENST00000333482 706 ntBASIC4.81□□□□□ -1.64
AP1S1P61966 RSU1P3-201ENST00000412878 835 ntBASIC4.81□□□□□ -1.64
AP1S1P61966 AC016769.2-201ENST00000414815 475 ntBASIC4.81□□□□□ -1.64
AP1S1P61966 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.81□□□□□ -1.64
AP1S1P61966 CKS1BP6-201ENST00000424932 240 ntBASIC4.81□□□□□ -1.64
AP1S1P61966 AL049745.1-201ENST00000433953 286 ntBASIC4.81□□□□□ -1.64
AP1S1P61966 AC005154.2-201ENST00000438110 379 ntBASIC4.81□□□□□ -1.64
AP1S1P61966 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.81□□□□□ -1.64
AP1S1P61966 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.81□□□□□ -1.64
AP1S1P61966 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.81□□□□□ -1.64
AP1S1P61966 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.81□□□□□ -1.64
AP1S1P61966 SBDSP1-204ENST00000453858 737 ntBASIC4.81□□□□□ -1.64
AP1S1P61966 AC090686.1-201ENST00000481577 749 ntBASIC4.81□□□□□ -1.64
AP1S1P61966 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.81□□□□□ -1.64
AP1S1P61966 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.81□□□□□ -1.64
AP1S1P61966 HMGB3P16-201ENST00000508037 287 ntBASIC4.81□□□□□ -1.64
AP1S1P61966 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.81□□□□□ -1.64
AP1S1P61966 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.81□□□□□ -1.64
AP1S1P61966 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.81□□□□□ -1.64
AP1S1P61966 AC008147.3-201ENST00000548666 354 ntBASIC4.81□□□□□ -1.64
AP1S1P61966 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.81□□□□□ -1.64
AP1S1P61966 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.81□□□□□ -1.64
AP1S1P61966 AC084759.1-201ENST00000561168 290 ntBASIC4.81□□□□□ -1.64
AP1S1P61966 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.81□□□□□ -1.64
AP1S1P61966 AL008729.2-201ENST00000606393 473 ntBASIC4.81□□□□□ -1.64
AP1S1P61966 AC100827.5-201ENST00000615883 426 ntBASIC4.81□□□□□ -1.64
AP1S1P61966 AC006840.1-201ENST00000623069 542 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms