Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
NKX2-1P43699 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.4□□□□□ -1.7
NKX2-1P43699 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.4□□□□□ -1.7
NKX2-1P43699 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NKX2-1P43699 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
NKX2-1P43699 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
NKX2-1P43699 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.4□□□□□ -1.71
NKX2-1P43699 COX6B1P3-201ENST00000312310 260 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NKX2-1P43699 RN7SKP153-201ENST00000365026 316 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 RNU6-481P-201ENST00000384194 107 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 MIR130B-202ENST00000385018 82 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NKX2-1P43699 RPL22P22-201ENST00000395439 379 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AL355615.1-201ENST00000406187 641 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AC013404.1-201ENST00000413068 249 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AL354890.1-201ENST00000413730 346 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AC048351.1-201ENST00000420064 602 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 BX284632.2-201ENST00000421091 399 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.4□□□□□ -1.71
NKX2-1P43699 FTH1P16-201ENST00000435241 552 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AC006335.2-201ENST00000437993 330 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 ATP5LP2-201ENST00000440646 311 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AL512605.1-202ENST00000441919 381 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AL359955.2-201ENST00000445380 353 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AC099063.2-201ENST00000446360 662 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AL935212.3-201ENST00000450729 284 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AC243772.1-201ENST00000451620 410 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 RNU6-1218P-201ENST00000458990 108 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 RPS17P15-201ENST00000475609 349 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.4□□□□□ -1.71
NKX2-1P43699 GTF2IP9-201ENST00000502460 301 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.4□□□□□ -1.71
NKX2-1P43699 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.4□□□□□ -1.71
NKX2-1P43699 NIFKP7-201ENST00000503365 834 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 NAMPTP2-201ENST00000505629 1115 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AC109464.1-201ENST00000511091 819 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 RN7SKP35-201ENST00000517210 151 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NKX2-1P43699 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.4□□□□□ -1.71
NKX2-1P43699 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.4□□□□□ -1.71
NKX2-1P43699 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.4□□□□□ -1.71
NKX2-1P43699 AC025260.1-201ENST00000548858 430 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 GLRXP2-201ENST00000555594 321 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AC127381.1-201ENST00000555979 939 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AC068714.1-201ENST00000559623 800 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 NPM1P47-201ENST00000560843 856 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 MIR3936-201ENST00000584304 110 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AC108673.3-201ENST00000609183 335 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AC124016.2-201ENST00000610058 665 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 MIR6889-201ENST00000613185 59 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AL050303.3-201ENST00000613704 284 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 MIR7109-201ENST00000613748 65 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AC084824.4-201ENST00000620106 731 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AP001005.3-201ENST00000622049 129 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.4□□□□□ -1.71
NKX2-1P43699 AL683826.1-201ENST00000624104 627 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AC103703.1-201ENST00000634783 663 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.4□□□□□ -1.71
NKX2-1P43699 AC009452.1-201ENST00000640823 606 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 AL132640.2-201ENST00000559968 1698 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
NKX2-1P43699 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NKX2-1P43699 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
NKX2-1P43699 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
NKX2-1P43699 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.4□□□□□ -1.71
NKX2-1P43699 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.4□□□□□ -1.71
NKX2-1P43699 MTND4P31-201ENST00000425607 1343 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
NKX2-1P43699 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NKX2-1P43699 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.4□□□□□ -1.71
NKX2-1P43699 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
NKX2-1P43699 SOCS5P3-201ENST00000425115 1576 ntBASIC4.4□□□□□ -1.71
NKX2-1P43699 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NKX2-1P43699 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NKX2-1P43699 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NKX2-1P43699 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
NKX2-1P43699 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NKX2-1P43699 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NKX2-1P43699 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NKX2-1P43699 SEC63P2-201ENST00000503863 1939 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 AL731566.1-201ENST00000620490 1937 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.39□□□□□ -1.71
NKX2-1P43699 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.39□□□□□ -1.71
NKX2-1P43699 IGKV7-3-201ENST00000357453 298 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 RNA5SP500-201ENST00000364486 119 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.39□□□□□ -1.71
NKX2-1P43699 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NKX2-1P43699 AL590290.1-201ENST00000405336 380 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 ATF1P1-201ENST00000406040 927 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.39□□□□□ -1.71
NKX2-1P43699 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.39□□□□□ -1.71
NKX2-1P43699 MTND6P12-201ENST00000428247 522 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 AC124944.2-201ENST00000429866 1242 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 RPL7P29-201ENST00000437151 728 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.39□□□□□ -1.71
NKX2-1P43699 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.39□□□□□ -1.71
NKX2-1P43699 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.39□□□□□ -1.71
NKX2-1P43699 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms