Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 RN7SKP99-201ENST00000517028 307 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC6.49□□□□□ -1.37
CNGA1P29973 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.49□□□□□ -1.37
CNGA1P29973 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.49□□□□□ -1.37
CNGA1P29973 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.49□□□□□ -1.37
CNGA1P29973 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC6.49□□□□□ -1.37
CNGA1P29973 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.49□□□□□ -1.37
CNGA1P29973 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.49□□□□□ -1.37
CNGA1P29973 AC022884.3-201ENST00000579571 248 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 AP001357.1-201ENST00000586304 1053 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.49□□□□□ -1.37
CNGA1P29973 AC125494.2-201ENST00000602431 657 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 AC006386.1-201ENST00000619436 415 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 AL121594.5-201ENST00000631724 573 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 AC073869.7-201ENST00000640874 297 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CNGA1P29973 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CNGA1P29973 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CNGA1P29973 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CNGA1P29973 AC099786.3-201ENST00000565735 1410 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CNGA1P29973 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CNGA1P29973 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CNGA1P29973 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CNGA1P29973 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CNGA1P29973 MFSD8-219ENST00000641228 2559 ntBASIC6.48□□□□□ -1.37
CNGA1P29973 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.48□□□□□ -1.37
CNGA1P29973 AC103591.2-201ENST00000265259 766 ntBASIC6.48□□□□□ -1.37
CNGA1P29973 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CNGA1P29973 AL021331.1-201ENST00000402817 582 ntBASIC6.48□□□□□ -1.37
CNGA1P29973 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CNGA1P29973 GAPDHP42-201ENST00000406848 981 ntBASIC6.48□□□□□ -1.37
CNGA1P29973 RN7SKP199-201ENST00000410325 305 ntBASIC6.48□□□□□ -1.37
CNGA1P29973 RN7SKP125-201ENST00000410481 302 ntBASIC6.48□□□□□ -1.37
CNGA1P29973 RN7SKP97-201ENST00000410966 333 ntBASIC6.48□□□□□ -1.37
CNGA1P29973 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CNGA1P29973 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC6.48□□□□□ -1.37
CNGA1P29973 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.48□□□□□ -1.37
CNGA1P29973 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.48□□□□□ -1.37
CNGA1P29973 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.48□□□□□ -1.37
CNGA1P29973 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.48□□□□□ -1.37
CNGA1P29973 CDC42P1-201ENST00000456658 548 ntBASIC6.48□□□□□ -1.37
CNGA1P29973 AL603882.1-201ENST00000463059 681 ntBASIC6.48□□□□□ -1.37
CNGA1P29973 PRELID3BP4-201ENST00000515476 571 ntBASIC6.48□□□□□ -1.37
CNGA1P29973 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.48□□□□□ -1.37
CNGA1P29973 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC6.48□□□□□ -1.37
CNGA1P29973 AP002812.4-201ENST00000532139 286 ntBASIC6.48□□□□□ -1.37
CNGA1P29973 AC139103.1-201ENST00000534696 1030 ntBASIC6.48□□□□□ -1.37
CNGA1P29973 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.48□□□□□ -1.37
CNGA1P29973 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.48□□□□□ -1.37
CNGA1P29973 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CNGA1P29973 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC6.48□□□□□ -1.37
CNGA1P29973 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.48□□□□□ -1.37
CNGA1P29973 AC079395.3-201ENST00000615161 484 ntBASIC6.48□□□□□ -1.37
CNGA1P29973 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.48□□□□□ -1.37
CNGA1P29973 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CNGA1P29973 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CNGA1P29973 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CNGA1P29973 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CNGA1P29973 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CNGA1P29973 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.48□□□□□ -1.37
CNGA1P29973 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.48□□□□□ -1.37
CNGA1P29973 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.48□□□□□ -1.37
CNGA1P29973 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CNGA1P29973 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CNGA1P29973 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.48□□□□□ -1.37
CNGA1P29973 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CNGA1P29973 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CNGA1P29973 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CNGA1P29973 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.47□□□□□ -1.37
CNGA1P29973 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CNGA1P29973 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
CNGA1P29973 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CNGA1P29973 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CNGA1P29973 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.47□□□□□ -1.37
CNGA1P29973 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CNGA1P29973 SNORD1C-201ENST00000363315 78 ntBASIC6.47□□□□□ -1.37
CNGA1P29973 RNU6-353P-201ENST00000364266 108 ntBASIC6.47□□□□□ -1.37
CNGA1P29973 RNU4-2-201ENST00000365668 141 ntBASIC6.47□□□□□ -1.37
CNGA1P29973 RNU6-549P-201ENST00000384433 107 ntBASIC6.47□□□□□ -1.37
CNGA1P29973 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CNGA1P29973 Y_RNA.578-201ENST00000390903 88 ntBASIC6.47□□□□□ -1.37
CNGA1P29973 AC136624.1-201ENST00000400791 413 ntBASIC6.47□□□□□ -1.37
CNGA1P29973 MTCO1P56-201ENST00000401674 224 ntBASIC6.47□□□□□ -1.37
CNGA1P29973 RN7SKP213-201ENST00000410746 298 ntBASIC6.47□□□□□ -1.37
CNGA1P29973 RNU4-22P-201ENST00000411058 166 ntBASIC6.47□□□□□ -1.37
CNGA1P29973 RN7SKP273-201ENST00000411392 314 ntBASIC6.47□□□□□ -1.37
CNGA1P29973 RPL37P18-201ENST00000411602 243 ntBASIC6.47□□□□□ -1.37
CNGA1P29973 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC6.47□□□□□ -1.37
CNGA1P29973 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.47□□□□□ -1.37
CNGA1P29973 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.47□□□□□ -1.37
CNGA1P29973 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CNGA1P29973 RPL31P44-201ENST00000447680 377 ntBASIC6.47□□□□□ -1.37
CNGA1P29973 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.47□□□□□ -1.37
CNGA1P29973 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.47□□□□□ -1.37
CNGA1P29973 RNU1-88P-201ENST00000459274 128 ntBASIC6.47□□□□□ -1.37
CNGA1P29973 RNU7-140P-201ENST00000459546 60 ntBASIC6.47□□□□□ -1.37
CNGA1P29973 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC6.47□□□□□ -1.37
CNGA1P29973 PGAM1P13-201ENST00000507497 754 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms