Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC093414.1-201ENST00000434712 514 ntBASIC3.96□□□□□ -1.78
CTSDP07339 PRPF38AP2-201ENST00000438179 851 ntBASIC3.96□□□□□ -1.78
CTSDP07339 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC3.96□□□□□ -1.78
CTSDP07339 OR2AF1P-201ENST00000454899 889 ntBASIC3.96□□□□□ -1.78
CTSDP07339 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.96□□□□□ -1.78
CTSDP07339 RPL7AP28-201ENST00000464513 571 ntBASIC3.96□□□□□ -1.78
CTSDP07339 AC097484.1-201ENST00000471148 389 ntBASIC3.96□□□□□ -1.78
CTSDP07339 UBA52P7-201ENST00000486088 380 ntBASIC3.96□□□□□ -1.78
CTSDP07339 OR9N1P-201ENST00000491296 333 ntBASIC3.96□□□□□ -1.78
CTSDP07339 AC011411.1-201ENST00000509592 876 ntBASIC3.96□□□□□ -1.78
CTSDP07339 COX6B1P5-201ENST00000509843 249 ntBASIC3.96□□□□□ -1.78
CTSDP07339 RNA5SP43-201ENST00000516559 110 ntBASIC3.96□□□□□ -1.78
CTSDP07339 OR7E128P-201ENST00000532736 1024 ntBASIC3.96□□□□□ -1.78
CTSDP07339 GLRXP2-201ENST00000555594 321 ntBASIC3.96□□□□□ -1.78
CTSDP07339 AL049839.1-201ENST00000556151 657 ntBASIC3.96□□□□□ -1.78
CTSDP07339 AC007066.2-202ENST00000566531 914 ntBASIC3.96□□□□□ -1.78
CTSDP07339 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CTSDP07339 AC027455.1-201ENST00000574104 594 ntBASIC3.96□□□□□ -1.78
CTSDP07339 MIR3176-201ENST00000582210 90 ntBASIC3.96□□□□□ -1.78
CTSDP07339 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.96□□□□□ -1.78
CTSDP07339 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.96□□□□□ -1.78
CTSDP07339 RPL7P50-201ENST00000600588 727 ntBASIC3.96□□□□□ -1.78
CTSDP07339 RPL26P30-202ENST00000602923 645 ntBASIC3.96□□□□□ -1.78
CTSDP07339 AL512329.2-201ENST00000607350 548 ntBASIC3.96□□□□□ -1.78
CTSDP07339 AC244517.3-201ENST00000616254 1235 ntBASIC3.96□□□□□ -1.78
CTSDP07339 AL158196.1-201ENST00000616786 434 ntBASIC3.96□□□□□ -1.78
CTSDP07339 AC131238.1-201ENST00000617135 328 ntBASIC3.96□□□□□ -1.78
CTSDP07339 MIR6826-201ENST00000617808 98 ntBASIC3.96□□□□□ -1.78
CTSDP07339 AC099494.2-201ENST00000623371 978 ntBASIC3.96□□□□□ -1.78
CTSDP07339 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC3.96□□□□□ -1.78
CTSDP07339 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.96□□□□□ -1.78
CTSDP07339 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.96□□□□□ -1.78
CTSDP07339 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CTSDP07339 AC027290.2-201ENST00000623210 18662 ntBASIC3.96□□□□□ -1.78
CTSDP07339 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
CTSDP07339 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.96□□□□□ -1.78
CTSDP07339 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CTSDP07339 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTSDP07339 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CTSDP07339 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CTSDP07339 AL136164.3-201ENST00000624429 3978 ntBASIC3.95□□□□□ -1.78
CTSDP07339 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTSDP07339 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CTSDP07339 XKRY2-202ENST00000623874 1581 ntBASIC3.95□□□□□ -1.78
CTSDP07339 XKRY-202ENST00000624960 1581 ntBASIC3.95□□□□□ -1.78
CTSDP07339 AC091046.3-201ENST00000631455 1574 ntBASIC3.95□□□□□ -1.78
CTSDP07339 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CTSDP07339 NXF4-202ENST00000416098 1465 ntBASIC3.95□□□□□ -1.78
CTSDP07339 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTSDP07339 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTSDP07339 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CTSDP07339 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTSDP07339 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CTSDP07339 RNA5SP183-201ENST00000362452 119 ntBASIC3.95□□□□□ -1.78
CTSDP07339 RNA5SP28-201ENST00000363841 119 ntBASIC3.95□□□□□ -1.78
CTSDP07339 RNU1-43P-201ENST00000365052 165 ntBASIC3.95□□□□□ -1.78
CTSDP07339 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC3.95□□□□□ -1.78
CTSDP07339 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC3.95□□□□□ -1.78
CTSDP07339 RN7SKP229-201ENST00000410465 302 ntBASIC3.95□□□□□ -1.78
CTSDP07339 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.95□□□□□ -1.78
CTSDP07339 ATP6V1G1P7-201ENST00000415853 349 ntBASIC3.95□□□□□ -1.78
CTSDP07339 AC012158.1-204ENST00000483430 465 ntBASIC3.95□□□□□ -1.78
CTSDP07339 RN7SL30P-201ENST00000488416 306 ntBASIC3.95□□□□□ -1.78
CTSDP07339 RN7SL244P-201ENST00000493405 297 ntBASIC3.95□□□□□ -1.78
CTSDP07339 AC024558.1-201ENST00000505008 528 ntBASIC3.95□□□□□ -1.78
CTSDP07339 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.95□□□□□ -1.78
CTSDP07339 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.95□□□□□ -1.78
CTSDP07339 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.95□□□□□ -1.78
CTSDP07339 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC3.95□□□□□ -1.78
CTSDP07339 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC3.95□□□□□ -1.78
CTSDP07339 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTSDP07339 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.95□□□□□ -1.78
CTSDP07339 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC3.95□□□□□ -1.78
CTSDP07339 AC093249.4-201ENST00000564755 259 ntBASIC3.95□□□□□ -1.78
CTSDP07339 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.95□□□□□ -1.78
CTSDP07339 AL137072.1-201ENST00000603444 466 ntBASIC3.95□□□□□ -1.78
CTSDP07339 AL121932.1-201ENST00000605542 214 ntBASIC3.95□□□□□ -1.78
CTSDP07339 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.95□□□□□ -1.78
CTSDP07339 AL356752.1-201ENST00000615844 593 ntBASIC3.95□□□□□ -1.78
CTSDP07339 AL022401.1-201ENST00000619498 108 ntBASIC3.95□□□□□ -1.78
CTSDP07339 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC3.95□□□□□ -1.78
CTSDP07339 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.95□□□□□ -1.78
CTSDP07339 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC3.95□□□□□ -1.78
CTSDP07339 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CTSDP07339 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTSDP07339 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
CTSDP07339 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTSDP07339 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CTSDP07339 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTSDP07339 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.94□□□□□ -1.78
CTSDP07339 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.94□□□□□ -1.78
CTSDP07339 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CTSDP07339 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTSDP07339 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CTSDP07339 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.94□□□□□ -1.78
CTSDP07339 SNORA68.2-201ENST00000391263 128 ntBASIC3.94□□□□□ -1.78
CTSDP07339 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTSDP07339 ATP5F1P2-201ENST00000398143 760 ntBASIC3.94□□□□□ -1.78
CTSDP07339 Z97832.1-201ENST00000402490 328 ntBASIC3.94□□□□□ -1.78
CTSDP07339 AL121834.1-202ENST00000404494 277 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms