Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC122134.1-201ENST00000565664 1104 ntBASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AP001004.1-201ENST00000582468 324 ntBASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AC010463.3-201ENST00000594077 500 ntBASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 GMFG-212ENST00000602185 423 ntTSL 3 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AL596327.1-201ENST00000603629 213 ntBASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AC126118.1-201ENST00000607744 628 ntBASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AC026634.1-201ENST00000634369 198 ntBASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 AC073869.7-201ENST00000640874 297 ntBASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 PABPC1P9-201ENST00000426076 1612 ntBASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
TMEM88BA6NKF7 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 UG0898H09-202ENST00000623646 7040 ntBASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 OR7E101P-201ENST00000400428 513 ntBASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 BOLA3P4-201ENST00000418151 400 ntBASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 AL389915.1-201ENST00000422463 466 ntBASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 SLC44A3-AS1-205ENST00000424505 612 ntBASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 RPS7P14-201ENST00000426405 583 ntBASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 NPM1P39-201ENST00000449818 867 ntBASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 AL122020.1-201ENST00000472287 459 ntBASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 MTAPP1-201ENST00000489154 819 ntBASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 RPL7P24-201ENST00000493052 752 ntBASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 AC011352.3-201ENST00000505162 593 ntBASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 AC108471.1-201ENST00000513977 287 ntBASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 FABP5P5-201ENST00000515537 406 ntBASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 RN7SKP98-201ENST00000517070 156 ntBASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 AC027309.2-201ENST00000520566 192 ntBASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 AC137768.1-201ENST00000549998 553 ntBASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 ZNF519P2-201ENST00000557032 169 ntBASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 U4.5-201ENST00000617137 123 ntBASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 AC243756.2-201ENST00000618406 463 ntBASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 AC135352.1-201ENST00000506173 1418 ntBASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
TMEM88BA6NKF7 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
TMEM88BA6NKF7 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.4□□□□□ -1.23
TMEM88BA6NKF7 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.23
TMEM88BA6NKF7 AC026464.2-201ENST00000567834 2421 ntBASIC7.4□□□□□ -1.23
TMEM88BA6NKF7 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.4□□□□□ -1.23
TMEM88BA6NKF7 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
TMEM88BA6NKF7 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
TMEM88BA6NKF7 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.4□□□□□ -1.23
TMEM88BA6NKF7 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
TMEM88BA6NKF7 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
TMEM88BA6NKF7 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms