Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLCA3PQ9Y6N3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLCA3PQ9Y6N3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 AC004264.1-201ENST00000608354 794 ntBASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCA3PQ9Y6N3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 UBE2SP1-201ENST00000450587 669 ntBASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CLCA3PQ9Y6N3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
CLCA3PQ9Y6N3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.39■□□□□ 0.54
CLCA3PQ9Y6N3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.39■□□□□ 0.54
CLCA3PQ9Y6N3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLCA3PQ9Y6N3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.39■□□□□ 0.54
CLCA3PQ9Y6N3 TCF3P1-201ENST00000423021 1937 ntBASIC18.39■□□□□ 0.53
CLCA3PQ9Y6N3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CLCA3PQ9Y6N3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.39■□□□□ 0.53
CLCA3PQ9Y6N3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCA3PQ9Y6N3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.39■□□□□ 0.53
CLCA3PQ9Y6N3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.39■□□□□ 0.53
CLCA3PQ9Y6N3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCA3PQ9Y6N3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CLCA3PQ9Y6N3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.39■□□□□ 0.53
CLCA3PQ9Y6N3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.39■□□□□ 0.53
CLCA3PQ9Y6N3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.39■□□□□ 0.53
CLCA3PQ9Y6N3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.39■□□□□ 0.53
CLCA3PQ9Y6N3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.39■□□□□ 0.53
CLCA3PQ9Y6N3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.39■□□□□ 0.53
CLCA3PQ9Y6N3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.39■□□□□ 0.53
CLCA3PQ9Y6N3 AP006294.2-201ENST00000641667 209 ntBASIC18.39■□□□□ 0.53
CLCA3PQ9Y6N3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CLCA3PQ9Y6N3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.39■□□□□ 0.53
CLCA3PQ9Y6N3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLCA3PQ9Y6N3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLCA3PQ9Y6N3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCA3PQ9Y6N3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
CLCA3PQ9Y6N3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCA3PQ9Y6N3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms